Clone MIP34586 Report

Search the DGRC for MIP34586

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:345
Well:86
Vector:pOTB7
Associated Gene/TranscriptCG12194-RA
Protein status:MIP34586.pep: gold
Sequenced Size:2271

Clone Sequence Records

MIP34586.complete Sequence

2271 bp assembled on 2012-02-29

GenBank Submission: BT133284.1

> MIP34586.complete
GAAATATTAAGTAAAGTTTTCCTGGATCGTAAGCCCGCCACAATCGCAAT
TCGAAAATATCGAATATTAACCGAAACACCCCCCATTCCAACCTTTCCAA
TTTCCATCATCTCTGTGTGCGGGAATAATCAATACTGCACAAATACTGAG
GCAACAGCAGCAACAACAACAACACGGAATTATGGTGTGGTCTAGTGATA
AGCAGCAACAGTAGGGCCACAGCCCGCCCCCAACCCCCCGCCTACCGCCC
ACCACCCACCACCGGTCGAGGAACAGGAATTCCGGAAAAGAGGAGCAGCC
ACAAATAGCAATTACCATCGCACAACTCAAATTTCCCGTCAACCCTCCAT
CATTCTGTCAACGAAAAGTGGCAATAATGTCACGCGAGGAGCGCAAACCC
ATCGTTAGCTCGTCGAGCAGCAGCACCTGCAGCAGCAGCGATGACGAAGT
GCATCCTGTGGTGCGGCGACGCAGCACTCGGGACACAGAGCTAGCCGGTC
ACCAGAAGGATGCCGGATGCTGTGATCCGACGAGCACGCCACATCGCTTC
CTCGCCCTGCTCTTTATGTGCCTCTTGGGTTTTGGTTCCTATTTTTGCTA
CGATAATCCCGGCGCACTGCAGGACGTTTTCCAAAAGGAACTGCAACTCA
GCTCCACCGAGTTCACGCTGATTTACTCCATCTACTCGTGGCCAAATATT
GTGCTCTGCTTTGTGGGCGGCTTCCTCATCGACCGGGTGTTTGGCATCCG
CCTGGGCACCATTATCTACATGCTGATCGTGCTCGTTGGCCAGTTGATCT
TCGCCACCGGCGGAGTCCTGGGCCACTTTTGGTTGATGATCGTGGGACGC
TTTGTTTTCGGCATCGGGGCTGAGTCGCTGGCTGTGGCCCAAAACAGCTA
TGCGGTGCTATGGTTCAAGGGCAAGGAGATTAACATGGTCTTTGGACTGC
AGTTGTCGGTAGCCCGTTTCGGCAGCACCGTCAACTTTTGGATTATGCAA
CCACTATATGGATACGTTTCGAAATCCTATTCCGGCTACAAGGGTCTGGG
CGTGGCCCTGTTCCTGGCCTCCTCAACGTGCGTCATGTCCCTGGTTTGCA
CCTTGATTCTAGGTTGGATGGACAAGCGCGCGGAGAGAATCCTTAAGCGA
AATAACAATCCTGGTGGAGAATTGGCCAAACTAAGCGATATAGTCACCTT
CAAGCTGGACTTCTGGATGGTGTCCGTGGTATGTGTGGCCTACTACGTTG
CCATCTTTCCTTTCGTGGCTCTTGGCCAGGCCTTCTTCGTCAGCAATTTC
CACATGACGCCGGATGAGGCGAACACAGTAAACTCGATTGTCTACCTGAT
CTCTGCTATAGCATCGCCACTGTTTGGATTTGTGATTGACAAGGTCGGAA
GGAATGTGACCTGGGTGTTCTGTGCCACCATCTCCACGCTGCTAGCTCAC
TTCCTGCTGACCTTCACCCATTTGGATCCGTACATCGGGATGAGCATAAT
GGGACTGTCCTATTCCATGTTGGCAGCCAGTCTGTGGCCCCTGGTTTCAT
TGATTGTGCCCGAATATCAACTGGGCACTGCATATGGCTTCTGTCAGTCT
GTGCAGAATCTGGGACTAGCGGTGGTGACCATTGCAGCGGGCATCATTGT
GGACAGCAGCGGCGGCAGTCACTTCTGGCTGCAGGTATTCTTCATGTCCT
TCCTGCTGGTCTCCCTGCTGGCCACCTGTGCGATTTGGGCCTACAACCGC
AAGCACCAGGGCAACTTGAACATGTCACCTGCCCAGCGGGCCACATACCA
CACCTCGATGTACGTGAATATTGAGTCGAGTTGAGCATGCTATTGATGTC
TTGCTGTTGTGTTCTAATCCCATATCCGATGATGACACTTCTCCACTTCA
GCCCCTGACTAATTAACGTTCTTTTTCTAAATGTATATTTGCTTTGTGTA
CATGCCAAAAGCGCGATGCAGTGCCGCCACATGAACAGGCGGCCTTTATT
GGGCAACTATGTGCAATAGATCGATTCTGTTTGTTACTAACCAATAACCA
ATTGCGATGCTAATGCCATTTCCACTACACTTGACTTGTTATGCAACTCG
GAGCACATTCTGCTAGCCGCACAATCGACGTGGTCATTCGATCTATTTTA
CTCCTCCTAGCCAACGTTCTATGATGATACATATCAAACTTTAAACTATT
GTTATATTTATGTTCCATTGTGTGTGATAAATAAATTTATGTAAATGTAC
ATTAAAAAAAAAAAAAAAAAA

MIP34586.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:55:11
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 4840003..4840547 1709..2253 2725 100 Plus
chr2L 23010047 chr2L 4838696..4839231 584..1119 2635 99.4 Plus
chr2L 23010047 chr2L 4838112..4838632 66..586 2500 98.7 Plus
chr2L 23010047 chr2L 4839281..4839761 1110..1590 2375 99.6 Plus
chr3L 24539361 chr3L 7319106..7320354 1779..531 980 71.9 Minus
chr2L 23010047 chr2L 4839815..4839933 1591..1709 595 100 Plus
chr2L 23010047 chr2L 4837586..4837650 1..65 325 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:55:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4840883..4841429 1709..2255 2735 100 Plus
2L 23513712 2L 4839576..4840111 584..1119 2665 99.8 Plus
2L 23513712 2L 4838992..4839512 66..586 2605 100 Plus
2L 23513712 2L 4840161..4840641 1110..1590 2405 100 Plus
3L 28110227 3L 7327027..7328192 1696..531 940 72 Minus
2L 23513712 2L 4840695..4840813 1591..1709 595 100 Plus
2L 23513712 2L 4838466..4838530 1..65 325 100 Plus
Blast to na_te.dros performed 2019-03-15 12:55:09
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 1114..1154 134..173 121 80.5 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3268..3313 128..174 115 74.5 Plus
BS 5142 BS BS 5142bp 2040..2106 150..210 114 68.7 Plus

MIP34586.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:56:19 Download gff for MIP34586.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 4837586..4837650 1..65 100 -> Plus
chr2L 4838112..4838630 66..584 98 -> Plus
chr2L 4838697..4839224 585..1112 99 -> Plus
chr2L 4839284..4839761 1113..1590 99 -> Plus
chr2L 4839815..4839933 1591..1709 100 -> Plus
chr2L 4840004..4840547 1710..2253 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2012-02-29 12:55:55 Download gff for MIP34586.complete
Subject Subject Range Query Range Percent Splice Strand
CG12194-RA 1..1458 377..1834 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:52:57 Download gff for MIP34586.complete
Subject Subject Range Query Range Percent Splice Strand
CG12194-RA 1..1458 377..1834 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:15:21 Download gff for MIP34586.complete
Subject Subject Range Query Range Percent Splice Strand
CG12194-RA 1..1458 377..1834 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-02-29 12:55:54 Download gff for MIP34586.complete
Subject Subject Range Query Range Percent Splice Strand
CG12194-RA 1..1961 293..2253 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:52:57 Download gff for MIP34586.complete
Subject Subject Range Query Range Percent Splice Strand
CG12194-RC 5..2257 1..2253 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:15:21 Download gff for MIP34586.complete
Subject Subject Range Query Range Percent Splice Strand
CG12194-RC 5..2257 1..2253 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:56:19 Download gff for MIP34586.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4838466..4838530 1..65 100 -> Plus
2L 4838992..4839510 66..584 100 -> Plus
2L 4839577..4840104 585..1112 100 -> Plus
2L 4840164..4840641 1113..1590 100 -> Plus
2L 4840695..4840813 1591..1709 100 -> Plus
2L 4840884..4841427 1710..2253 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:56:19 Download gff for MIP34586.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4838466..4838530 1..65 100 -> Plus
2L 4838992..4839510 66..584 100 -> Plus
2L 4839577..4840104 585..1112 100 -> Plus
2L 4840164..4840641 1113..1590 100 -> Plus
2L 4840695..4840813 1591..1709 100 -> Plus
2L 4840884..4841427 1710..2253 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:56:19 Download gff for MIP34586.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4838466..4838530 1..65 100 -> Plus
2L 4838992..4839510 66..584 100 -> Plus
2L 4839577..4840104 585..1112 100 -> Plus
2L 4840164..4840641 1113..1590 100 -> Plus
2L 4840695..4840813 1591..1709 100 -> Plus
2L 4840884..4841427 1710..2253 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:52:57 Download gff for MIP34586.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4838466..4838530 1..65 100 -> Plus
arm_2L 4838992..4839510 66..584 100 -> Plus
arm_2L 4839577..4840104 585..1112 100 -> Plus
arm_2L 4840164..4840641 1113..1590 100 -> Plus
arm_2L 4840695..4840813 1591..1709 100 -> Plus
arm_2L 4840884..4841427 1710..2253 100   Plus

MIP34586.hyp Sequence

Translation from 376 to 1833

> MIP34586.hyp
MSREERKPIVSSSSSSTCSSSDDEVHPVVRRRSTRDTELAGHQKDAGCCD
PTSTPHRFLALLFMCLLGFGSYFCYDNPGALQDVFQKELQLSSTEFTLIY
SIYSWPNIVLCFVGGFLIDRVFGIRLGTIIYMLIVLVGQLIFATGGVLGH
FWLMIVGRFVFGIGAESLAVAQNSYAVLWFKGKEINMVFGLQLSVARFGS
TVNFWIMQPLYGYVSKSYSGYKGLGVALFLASSTCVMSLVCTLILGWMDK
RAERILKRNNNPGGELAKLSDIVTFKLDFWMVSVVCVAYYVAIFPFVALG
QAFFVSNFHMTPDEANTVNSIVYLISAIASPLFGFVIDKVGRNVTWVFCA
TISTLLAHFLLTFTHLDPYIGMSIMGLSYSMLAASLWPLVSLIVPEYQLG
TAYGFCQSVQNLGLAVVTIAAGIIVDSSGGSHFWLQVFFMSFLLVSLLAT
CAIWAYNRKHQGNLNMSPAQRATYHTSMYVNIESS*

MIP34586.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:57:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG12194-PC 485 CG12194-PC 1..485 1..485 2524 100 Plus
CG12194-PA 485 CG12194-PA 1..485 1..485 2524 100 Plus
CG12194-PB 496 CG12194-PB 1..478 1..478 2486 99.8 Plus
CG8602-PB 478 CG8602-PB 1..478 1..483 1821 70 Plus
CG8602-PA 478 CG8602-PA 1..478 1..483 1821 70 Plus

MIP34586.pep Sequence

Translation from 376 to 1833

> MIP34586.pep
MSREERKPIVSSSSSSTCSSSDDEVHPVVRRRSTRDTELAGHQKDAGCCD
PTSTPHRFLALLFMCLLGFGSYFCYDNPGALQDVFQKELQLSSTEFTLIY
SIYSWPNIVLCFVGGFLIDRVFGIRLGTIIYMLIVLVGQLIFATGGVLGH
FWLMIVGRFVFGIGAESLAVAQNSYAVLWFKGKEINMVFGLQLSVARFGS
TVNFWIMQPLYGYVSKSYSGYKGLGVALFLASSTCVMSLVCTLILGWMDK
RAERILKRNNNPGGELAKLSDIVTFKLDFWMVSVVCVAYYVAIFPFVALG
QAFFVSNFHMTPDEANTVNSIVYLISAIASPLFGFVIDKVGRNVTWVFCA
TISTLLAHFLLTFTHLDPYIGMSIMGLSYSMLAASLWPLVSLIVPEYQLG
TAYGFCQSVQNLGLAVVTIAAGIIVDSSGGSHFWLQVFFMSFLLVSLLAT
CAIWAYNRKHQGNLNMSPAQRATYHTSMYVNIESS*

MIP34586.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:54:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15492-PA 485 GF15492-PA 1..485 1..485 2405 94 Plus
Dana\GF23860-PA 478 GF23860-PA 27..478 31..483 1823 72.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:54:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25021-PA 485 GG25021-PA 1..485 1..485 2507 97.3 Plus
Dere\GG14980-PA 478 GG14980-PA 1..478 1..483 1842 69.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:54:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13224-PA 484 GH13224-PA 1..483 1..485 2152 85 Plus
Dgri\GH15505-PA 476 GH15505-PA 1..476 1..483 1839 69.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:28:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG12194-PC 485 CG12194-PC 1..485 1..485 2524 100 Plus
CG12194-PA 485 CG12194-PA 1..485 1..485 2524 100 Plus
CG12194-PB 496 CG12194-PB 1..478 1..478 2486 99.8 Plus
CG8602-PB 478 CG8602-PB 1..478 1..483 1821 70 Plus
CG8602-PA 478 CG8602-PA 1..478 1..483 1821 70 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:54:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18103-PA 480 GI18103-PA 1..480 1..485 2234 85.4 Plus
Dmoj\GI16781-PA 476 GI16781-PA 1..476 1..483 1864 70.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:54:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19373-PA 483 GL19373-PA 1..483 1..485 2297 91.3 Plus
Dper\GL21156-PA 455 GL21156-PA 1..445 1..474 1651 65.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:54:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11470-PA 483 GA11470-PA 1..483 1..485 2297 91.3 Plus
Dpse\GA21198-PA 480 GA21198-PA 1..470 1..474 1832 70.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:54:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18494-PA 485 GM18494-PA 1..485 1..485 2564 99.6 Plus
Dsec\GM13776-PA 478 GM13776-PA 1..478 1..483 1859 70 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:54:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23302-PA 485 GD23302-PA 1..485 1..485 2564 99.6 Plus
Dsim\GD13074-PA 451 GD13074-PA 1..451 1..483 1692 64.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:54:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16290-PA 480 GJ16290-PA 1..480 1..485 2222 87.8 Plus
Dvir\GJ12524-PA 478 GJ12524-PA 1..478 1..483 1858 70.7 Plus
Dvir\GJ17716-PA 96 GJ17716-PA 23..80 110..178 157 50.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:54:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24465-PA 495 GK24465-PA 1..479 1..478 2201 89.6 Plus
Dwil\GK17524-PA 355 GK17524-PA 1..345 132..474 1380 73.3 Plus
Dwil\GK17522-PA 111 GK17522-PA 1..106 1..112 267 50.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:54:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18310-PA 485 GE18310-PA 1..485 1..485 2524 97.9 Plus
Dyak\GE20427-PA 480 GE20427-PA 1..480 1..483 1812 68.7 Plus