MXO01006.5prime Sequence
420 bp (420 high quality bases) assembled on 2006-12-21
> MXO01006.5prime
CAGTCGACATGGAGCCCACCAATTCGGAGTCGCGGCACCGCCTAAATGGA
GGGGGCAGGAGTTCCGCGCCAGCAGGCTCCGGAGAGTACATCAAGGTGGT
GGAGTCCCAATGCGAGACCGATGGATTCGTTAATGAACAGTGGACGGAAC
CGGCGATGCCAGGTCCAGTGCCTTGGAAGACCATTATTATCATTCTTTTG
CTGTTTATCGGTGGCATTGTTTGCATCGCCTTTGCCACCTTAAACTGGGT
GACGGACACGAGCCGGGAGCGATCGGATCGGGTGTGGGCGTTGGGTATCA
TCGGGGCACTGACCTTCATCCCGGGAAGCTACTATGTGTACGTGCTCTTC
TGCATAATGCTCAACCGCAACGGATTCACCATGGACGAGATACGAAGACT
CGGCGCAAGCTTTCTAGACC
MXO01006.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:19:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2611-PA | 399 | CG2611-RA | 1..396 | 9..404 | 1980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2611-RA | 634 | CG2611-RA | 63..458 | 9..404 | 1980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 20650251..20650462 | 9..220 | 1060 | 100 | Plus |
2L | 23513712 | 2L | 20650537..20650722 | 219..404 | 930 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:04:10 has no hits.
MXO01006.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:23:17 Download gff for
MXO01006.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2611-PA | 1..399 | 9..407 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:14:30 Download gff for
MXO01006.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2611-PA | 1..399 | 9..407 | 99 | | Plus |
Sim4 to dmel-all-transcript-r4.3.fasta performed 2006-07-14 13:26:41 Download gff for
MXO01006.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2611-RA | 53..457 | 1..408 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:26:07 Download gff for
MXO01006.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2611-RA | 58..462 | 1..408 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:23 Download gff for
MXO01006.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2611-RA | 58..462 | 1..408 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:23 Download gff for
MXO01006.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 20650246..20650460 | 1..218 | 98 | -> | Plus |
2L | 20650537..20650729 | 219..409 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:26:07 Download gff for
MXO01006.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 20650246..20650460 | 1..218 | 98 | -> | Plus |
arm_2L | 20650537..20650729 | 219..409 | 98 | -> | Plus |