MXO01008.5prime Sequence
444 bp (444 high quality bases) assembled on 2006-12-21
> MXO01008.5prime
CAGTCGACATGGGCGAACCAAGGAGCCAACCACCCGTGGAGCGTCCACCG
ACCGCGGAAACCTTTCTGCCCCTCAGCCGCGTGCGAACGATCATGAAGAG
CTCCATGGACACGGGCTTGATCACCAACGAGGTGCTCTTCCTGATGACCA
AGTGCACGGAGCTATTCGTTCGCCATTTGGCGGGCGCGGCATACACGGAG
GAATTCGGCCAGCGACCGGGCGAAGCGCTCAAGTACGAGCATCTCTCCCA
GGTGGTCAATAAGAACAAGAATCTGGAGTTTCTGCTGCAGATCGTGCCGC
AAAAGATCCGTGTACACCAGTTCCAGGAGATGCTGCGGCTAAATCGCTCC
GCCGGCAGCGACGACGACGATGACGACGACGATGATGACGATGAAGAAGA
GTCCGAATCGGAATCGGAGTCTGATGAAGCAAGCTTTCTAGACC
MXO01008.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:19:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15736-PA | 423 | Chrac-16-RA | 1..420 | 9..428 | 2100 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:45:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Chrac-16-RB | 737 | CG15736-RB | 89..508 | 9..428 | 2100 | 100 | Plus |
| Chrac-16-RA | 685 | CG15736-RA | 89..508 | 9..428 | 2100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:45:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12017454..12017873 | 428..9 | 2100 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 19:45:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 7909..7980 | 216..147 | 111 | 65.3 | Minus |
MXO01008.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:23:20 Download gff for
MXO01008.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15736-PA | 1..423 | 9..429 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:14:31 Download gff for
MXO01008.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15736-PA | 1..423 | 9..429 | 99 | | Plus |
Sim4 to dmel-all-transcript-r4.3.fasta performed 2006-07-14 13:26:45 Download gff for
MXO01008.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15736-RA | 84..503 | 9..428 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:15 Download gff for
MXO01008.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chrac-16-RA | 89..508 | 9..428 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:26 Download gff for
MXO01008.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Chrac-16-RA | 89..508 | 9..428 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:26 Download gff for
MXO01008.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12017454..12017873 | 9..428 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:15 Download gff for
MXO01008.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11911487..11911906 | 9..428 | 100 | | Minus |
