MXO01009.5prime Sequence
462 bp (462 high quality bases) assembled on 2006-12-21
> MXO01009.5prime
CAGTCGACATGGTGGGCTCCAATTTCGGAATTATTTACCACAACAGCGCC
GGTGGCGCAAGCAGTCATGGACAATCCTCGGGAGGAGGTGGCGGTGGAGA
TCGGGATAGGACCACACCATCTTCGCATCTCAGCGACTTCATGTCGCAGC
TGGAAGATTATACTCCATTGATTCCGGATGCGGTCACCTCGCACTATCTC
AACATGGGAGGCTTTCAGTCGGACGACAAGCGCATCGTTCGGCTGATCAG
CCTAGCCGCCCAGAAGTACATGTCCGACATCATCGACGATGCACTGCAGC
ACTCCAAGGCGCGCACCCATATGCAAACCACCAATACACCGGGAGGATCG
AAGGCCAAGGACCGCAAGTTCACCTTGACCATGGAGGATCTGCAGCCGGC
TTTGGCCGACTACGGTATTAATGTTAGGAAAGTGGACTATAGTCAGGCAA
GCTTTCTAGACC
MXO01009.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:19:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3069-PA | 441 | Taf10b-RA | 1..438 | 9..446 | 2190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:11:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taf10b-RA | 560 | CG3069-RA | 69..506 | 9..446 | 2190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:11:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2767340..2767777 | 446..9 | 2190 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:11:14 has no hits.
MXO01009.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:23:22 Download gff for
MXO01009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3069-PA | 1..441 | 9..447 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:14:31 Download gff for
MXO01009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3069-PA | 1..441 | 9..447 | 99 | | Plus |
Sim4 to dmel-all-transcript-r4.3.fasta performed 2006-07-14 13:26:47 Download gff for
MXO01009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3069-RA | 265..705 | 4..446 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:26 Download gff for
MXO01009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf10b-RA | 66..506 | 4..446 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:42:23 Download gff for
MXO01009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf10b-RA | 66..506 | 4..446 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:23 Download gff for
MXO01009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2767340..2767780 | 4..446 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:26 Download gff for
MXO01009.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2767340..2767780 | 4..446 | 99 | | Minus |
