MXO01010.5prime Sequence
474 bp (474 high quality bases) assembled on 2006-12-21
> MXO01010.5prime
CAGTCGACATGGACAAGAAATCCTCGCCGGTGCGACGACAAAAGCGGCAG
GCGAAGGTGATCGAGGAGAACTTCTGGGACTGCAGCGTCTGCACATATAG
AAACTCGGCGGAGGCCTTCAAGTGTCGCATGTGCGACGTGCGGAAAGGAA
CCTCCACGCGAAAGCCACGCCTGAACTCAGCGCTAGTCGCCCAGCAGGCC
GCCACTTTGCCAGGAGCCAGTGTCAACATGCCCAACGGGAAGTCCGCCTC
CGGATCACGGCATGGCAGTGGGCACGACCGGCAGAGGCACAAGCGGTATC
CGGCACGGTTGAAAAACGTGGACCGATCGACGGCACAGACGCGAGAGGTG
ACGGTCAACTCGGTGACCGTGTTCATCACAGAGTACAAGGCCAAGCCGGT
GAGCAGCCGACGCGAATCCAGTGAGCAGAGCTTCAGCGAGAGCAACGACA
GCCGGAGTGCAAGCTTTCTAGACC
MXO01010.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:19:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12190-PA | 453 | CG12190-RA | 1..450 | 9..458 | 2250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RYBP-RB | 2242 | CG12190-RB | 521..970 | 9..458 | 2250 | 100 | Plus |
RYBP-RA | 2064 | CG12190-RA | 343..792 | 9..458 | 2250 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22671628..22671940 | 146..458 | 1565 | 100 | Plus |
2R | 25286936 | 2R | 22671107..22671246 | 9..148 | 700 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:46:56 has no hits.
MXO01010.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:23:24 Download gff for
MXO01010.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12190-PA | 1..453 | 9..459 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:14:32 Download gff for
MXO01010.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12190-PA | 1..453 | 9..459 | 99 | | Plus |
Sim4 to dmel-all-transcript-r4.3.fasta performed 2006-07-14 13:26:49 Download gff for
MXO01010.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12190-RA | 351..805 | 3..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:00 Download gff for
MXO01010.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RYBP-RA | 356..810 | 3..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:03 Download gff for
MXO01010.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RYBP-RA | 338..792 | 3..458 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:03 Download gff for
MXO01010.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22671102..22671245 | 3..147 | 97 | -> | Plus |
2R | 22671630..22671940 | 148..458 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:00 Download gff for
MXO01010.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18558607..18558750 | 3..147 | 97 | -> | Plus |
arm_2R | 18559135..18559445 | 148..458 | 100 | | Plus |