MXO01012.5prime Sequence
492 bp (492 high quality bases) assembled on 2006-12-21
> MXO01012.5prime
CAGTCGACATGAGCAATAGCGAGGACTCGCAGCAGTATCTGAACGACATG
CTGGTCAAGGAGGAGGACGAGGCGTCCGGCGACGATTCGGACAAACAGGA
TGGAGGGATAATGCTACGCGAACAGGACCGATTTCTGCCCATCTGCAACA
TCATTAAGATCATGAAGGTTCCGGTGCCCCAGAACGGCAAGATAGCCAAG
GATGCACGAGAGTGCATCCAGGAGTGTGTCTCCGAGTTCATATCCTTCAT
TAGCAGTGAGGCCATCGAACGTAGCGTCGCGGAGAATCGCAAGACAGTCA
ACGGGGACGACCTGCTGGTGGCGTTCAGCAATCTGGGATTCGACAATTAC
GTGGAACCACTGTCCATTTACCTGCAAAAGTACCGAGAGTCGAACAAATC
GGATCGTAATCTCTTTCTGGACGCCAGTTATCCGCACAACGAAGATGGGT
CCTCCGCAAACGATGCGGGGAAACAGGCAAGCTTTCTAGACC
MXO01012.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:19:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10447-PA | 471 | CG10447-RA | 1..468 | 9..476 | 2340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Nf-YB-RB | 796 | CG10447-RB | 93..560 | 9..476 | 2340 | 100 | Plus |
Nf-YB-RA | 928 | CG10447-RA | 93..560 | 9..476 | 2340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19736272..19736580 | 81..389 | 1545 | 100 | Plus |
2L | 23513712 | 2L | 19736632..19736720 | 388..476 | 445 | 100 | Plus |
2L | 23513712 | 2L | 19736136..19736208 | 9..81 | 365 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 21:10:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
G5 | 4856 | G5 G5_DM 4856bp | 583..664 | 106..23 | 135 | 65.5 | Minus |
MXO01012.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:23:27 Download gff for
MXO01012.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10447-PA | 1..471 | 9..480 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:14:32 Download gff for
MXO01012.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10447-PA | 1..471 | 9..480 | 99 | | Plus |
Sim4 to dmel-all-transcript-r4.3.fasta performed 2006-07-14 13:26:53 Download gff for
MXO01012.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10447-RA | 76..552 | 1..480 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:57:58 Download gff for
MXO01012.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Nf-YB-RA | 87..563 | 1..480 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:19 Download gff for
MXO01012.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Nf-YB-RA | 87..563 | 1..480 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:19 Download gff for
MXO01012.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19736130..19736208 | 1..81 | 95 | -> | Plus |
2L | 19736273..19736580 | 82..389 | 100 | -> | Plus |
2L | 19736634..19736723 | 390..480 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:57:58 Download gff for
MXO01012.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19736130..19736208 | 1..81 | 95 | -> | Plus |
arm_2L | 19736273..19736580 | 82..389 | 100 | -> | Plus |
arm_2L | 19736634..19736723 | 390..480 | 97 | | Plus |