MXO01013.5prime Sequence
528 bp (348 high quality bases) assembled on 2010-12-10
> MXO01013.5prime
CAGTCGACATGGCTTCCGATGGCGAGGACGTCAGTGTTACACCCGCAGAA
TCCGTAACATCGGGCACGGACACCGAGGAGGAGGATATAGACTCGCCACT
AATGCAGTCCGAACTGCATTCCGACGAGGAGCAACCGGACGTGGAGGAGG
TTCCTCTGACCACGGAGGAATCGGAGATGGATGAGCTGATAAAGCAGCTG
GAGGACTACTCCCCCACCATACCAGACGCCCTCACCATGCACATCTTGAA
AACGGCTGGCTTCTGCACAGTGGACCCCAAGATAGTGCGCCTCGTCTCGG
TGTCCGCGCATAAGTTCATCTCGGATGTTGCCAACGACGCACTGCAGCAC
TGCAGAGACGCGCACCACGAACATCCGGCATTCCAGCGGACACAGTTCCA
GCAAGGACAAGAAAAACCCCAAGGACAGGAAGTACACGCTGGCCATGGAG
GACCTGGTGCCGGCACTCGCGGACCACGGCATCACCATGCGCAAGCCGCA
ATATTTCGTTGCAAGCTTTCTAGACCAT
MXO01013.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-29 13:07:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Taf10-RA | 664 | CG2859-RA | 92..592 | 9..510 | 2365 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-29 13:07:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2767981..2768227 | 9..255 | 1175 | 98.4 | Plus |
2L | 23513712 | 2L | 2768285..2768540 | 254..510 | 1175 | 98.1 | Plus |
Blast to na_te.dros performed 2015-01-29 13:07:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
invader3 | 5484 | invader3 INVADER3 5484bp | 4126..4175 | 89..138 | 106 | 68 | Plus |
MXO01013.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:44:34 Download gff for
MXO01013.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf10-RA | 80..587 | 9..519 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:09:00 Download gff for
MXO01013.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf10-RA | 92..599 | 9..519 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-29 14:13:08 Download gff for
MXO01013.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf10-RA | 92..599 | 9..519 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-29 14:13:08 Download gff for
MXO01013.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2767981..2768226 | 9..254 | 98 | -> | Plus |
2L | 2768286..2768547 | 255..519 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:09:00 Download gff for
MXO01013.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2767981..2768226 | 9..254 | 98 | -> | Plus |
arm_2L | 2768286..2768547 | 255..519 | 96 | | Plus |