MXO01014.5prime Sequence
531 bp (531 high quality bases) assembled on 2006-12-21
> MXO01014.5prime
CAGTCGACATGAACGCGGAAAAGCTGAAGAAGTTGCAGGCGCAGGTGCGC
ATTGGCGGCAAGGGCACCCCTCGCCGCAAGAAGAAGATCGTCCACTCCAC
GCCCGCCACCGACGACAAGAAGCTGCAGTCGTCGCTCAAGAAGCTGTCGG
TAAACACAATTCCCGGCATCGAGGAGGTGAACATCATCAAGAACGATGGC
ACCGTCATCCACTTCAACAATCCGAAGGCCCAGGCCTCGCTGCCGACGAA
CACGTTTGCCATCACGGGTCATGGCGAGAACAAGACGATCACCGAGATGG
TGCCCGGCATTCTGACGCAACTGGGTCCCCAGGACATCAACCAGCTGAAG
AAGCTGGCCACGGAGATTGCCAGCAAGAGCGGCGCCGGCGGAGCAGCCGG
CTCTTCAGCCGCCGATGCCGGTGACGATGATGTGCCCGATCTGGTCGAGA
ACTTCGAGGAGGTGGCCATCGCCGACACAAAGGAGGAGAAGTCCGGTGAG
GTGGCGGCCTCCGCTGCAAGCTTTCTAGACC
MXO01014.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:19:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3644-PA | 510 | bic-RA | 1..507 | 9..515 | 2535 | 100 | Plus |
| CG3644-PB | 510 | bic-RB | 1..507 | 9..515 | 2535 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:57:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bic-RB | 992 | CG3644-RB | 155..661 | 9..515 | 2535 | 100 | Plus |
| bic-RA | 1474 | CG3644-RA | 83..589 | 9..515 | 2535 | 100 | Plus |
| CG11835-RD | 3183 | CG11835-RD | 568..840 | 7..279 | 585 | 81.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:57:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12870403..12870909 | 9..515 | 2535 | 100 | Plus |
| 2L | 23513712 | 2L | 562911..563183 | 279..7 | 585 | 81 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:57:59 has no hits.
MXO01014.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:23:28 Download gff for
MXO01014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bic-PA | 1..510 | 9..516 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:14:33 Download gff for
MXO01014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3644-PB | 1..510 | 9..516 | 99 | | Plus |
Sim4 to dmel-all-transcript-r4.3.fasta performed 2006-07-14 13:26:55 Download gff for
MXO01014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3644-RB | 149..661 | 9..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:01 Download gff for
MXO01014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bic-RA | 75..595 | 1..522 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:53 Download gff for
MXO01014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bic-RA | 75..595 | 1..522 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:53 Download gff for
MXO01014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12870403..12870915 | 9..522 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:01 Download gff for
MXO01014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8757908..8758420 | 9..522 | 99 | | Plus |
