MXO01022.5prime Sequence
675 bp (675 high quality bases) assembled on 2006-12-21
> MXO01022.5prime
CAGTCGACATGGATAAGATGACGGTTGCCCAGAAGAACGCATATCTCGAG
GCGCACATGGCGGTGCAGCAGCAGATGGCCCAGGCGGCCATTCAGTTCAA
GCAGCAGCAGACGTCCCAGCAACAGAACTCCCCCACGGCCAACAACAACA
ACAACAGCCAGAACAATGGCAACATGCAGCAGCAACAGCAGCAGCAGCAG
CAGCAACAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCATTATGCAGC
AACCATCAAGGTGCCGCAGATCAGTTCCTCCAATGTGGCAGCCGCGGCGG
CGGGGGAGAGCACCTTCACAGTTCCGGACGACGGAATGGGATTCGAAGGA
GGCGTGCGGGTCCTGCAGAGTCTGGGAACCTGGTCGGCGGCCGAGCAACT
GACCTACAACATCCCCAAGCCCAACCTCATCCCCTTCACAGAGCCCTATG
TCGAGGGGGGCTCCATGCACCCCGCCAGTCGACTCAAGGCCCTGCAACAG
GTGCAACAGGCATCCTCCGGGGTGCGCAAGACAAATCCCTCAAAGTCCAC
CAACAAGGCATTCGAGTGCACGGTCTGCGGCAAAGGACTCGCCCGCAAGG
ACAAGCTGACCATCCACATGCGCATCCACACCGGCGAGAAGCCCTATATT
TGTGAAGTAGCAAGCTTTCTAGACC
MXO01022.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:20:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12071-PA | 654 | CG12071-RA | 1..651 | 9..659 | 3255 | 100 | Plus |
CG12071-PB | 1737 | CG12071-RB | 1..650 | 9..658 | 3250 | 100 | Plus |
CG6654-PA | 1920 | CG6654-RA | 1287..1313 | 614..640 | 135 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:04:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12071-RE | 2640 | CG12071-RE | 279..930 | 7..658 | 3260 | 100 | Plus |
CG12071-RD | 2155 | CG12071-RD | 279..930 | 7..658 | 3260 | 100 | Plus |
CG12071-RG | 2155 | CG12071-RG | 279..930 | 7..658 | 3260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:04:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30879354..30879893 | 546..7 | 2700 | 100 | Minus |
3R | 32079331 | 3R | 30879130..30879242 | 659..547 | 565 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 22:04:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2347..2510 | 100..269 | 348 | 72.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2456..2649 | 65..253 | 172 | 59.2 | Plus |
MXO01022.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:23:42 Download gff for
MXO01022.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12071-PA | 1..654 | 9..663 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:14:36 Download gff for
MXO01022.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12071-PA | 1..654 | 9..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r4.3.fasta performed 2006-07-14 13:27:12 Download gff for
MXO01022.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12071-RA | 121..785 | 1..666 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:56 Download gff for
MXO01022.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12071-RB | 121..784 | 1..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:50 Download gff for
MXO01022.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12071-RG | 273..936 | 1..663 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:50 Download gff for
MXO01022.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30879124..30879242 | 547..666 | 98 | <- | Minus |
3R | 30879354..30879898 | 1..546 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:56 Download gff for
MXO01022.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26704846..26704964 | 547..666 | 98 | <- | Minus |
arm_3R | 26705076..26705620 | 1..546 | 99 | | Minus |