MXO01029.5prime Sequence
783 bp (783 high quality bases) assembled on 2006-12-21
> MXO01029.5prime
CAGTCGACATGTCCATCCTGAAGGAGCTGAATGTCCAGGAGTACGAGCCG
CGCGTGGTCAACCAACTGCTGGAGTTCACCTTCCGCTATGTAACCTGCAT
TCTGGACGACGCCAAGGTGTACGCCAACCATGCGCGCAAGAAGACCATCG
ACTTGGACGACGTGCGTCTGGCCACCGAGGTTACGCTGGACAAGAGCTTC
ACCGGGCCGTTGGAGCGCCACGTTCTAGCCAAGGTGGCCGACGTGCGCAA
CAGCATGCCCCTGCCACCCATTAAGCCGCACTGCGGTCTCCGACTGCCGC
CCGACCGCTACTGTCTCACCGGCGTCAACTACAAACTGCGGGCCACTAAT
CAGCCCAAGAAAATGACCAAGTCGGCGGTGGAGGGCCGTCCACTGAAGAC
CGTCGTTAAGCCCGTCTCCAGCGCCAATGGTCCGAAGAGGCCACACTCCG
TGGTGGCCAAGCAGCAGGTGGTGACCATTCCCAAGCCCGTCATCAAGTTT
ACCACCACTACGACAACGAAAACGGTGGGCAGCTCCGGCGGATCTGGGGG
CGGCGGTGGTCAGGAGGTTAAGAGCGAGAGCACCGGCGCCGGCGGAGATC
TCAAGATGGAGGTGGACAGCGATGCGGCGGCCGTGGGCAGCATCGCTGGC
GCATCCGGTTCGGGAGCAGGAAGTGCCAGCGGAGGAGGAGGAGGAGGAGG
ATCATCTGGCGTTGGAGTGGCCGTCAAGCGGGAACGTGAGGAGGAGGAGT
TTGAGTTTGTGACCAACGCAAGCTTTCTAGACC
MXO01029.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:20:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6474-PA | 837 | e(y)1-RA | 75..834 | 8..767 | 3800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| e(y)1-RA | 1124 | CG6474-RA | 173..932 | 8..767 | 3800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17842474..17843156 | 85..767 | 3415 | 100 | Plus |
| X | 23542271 | X | 17842333..17842410 | 8..85 | 390 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 21:11:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Doc4-element | 2791 | Doc4-element DOC4 2791bp | 1457..1487 | 717..687 | 110 | 83.9 | Minus |
MXO01029.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:23:53 Download gff for
MXO01029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6474-PA | 67..837 | 1..768 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:14:38 Download gff for
MXO01029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6474-PA | 67..837 | 1..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r4.3.fasta performed 2006-07-14 13:27:28 Download gff for
MXO01029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6474-RA | 151..922 | 1..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:58:44 Download gff for
MXO01029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| e(y)1-RA | 165..936 | 1..773 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:57 Download gff for
MXO01029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| e(y)1-RA | 165..936 | 1..773 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:57 Download gff for
MXO01029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17842325..17842409 | 1..84 | 96 | -> | Plus |
| X | 17842474..17843160 | 85..773 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:58:44 Download gff for
MXO01029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17736358..17736442 | 1..84 | 96 | -> | Plus |
| arm_X | 17736507..17737193 | 85..773 | 99 | | Plus |
