MXO01036.5prime Sequence
801 bp (801 high quality bases) assembled on 2006-12-21
> MXO01036.5prime
CAGTCGACATGGGCTGTCGGAGCCGGCGGGCGGACGGAGCTGCCTCACCA
ACGCCGTCGGACAGCTCCGACTCGGACATCTCACTGGGCACCCACTCGCC
GGTGCCGAGCAGCCTGCAGCTGCAGCATAGTCCGGGCAGCACCTCCAACG
GCGCCAACGACCGCGAGGAGAGCCTGAGCGTGGACGACGACAAGCCGCGG
GATCTGAGCGGATCGCTGCCACTGCCCCTCTCGCTGCCCCTGCCGCTGGC
CTCGCCCACCCACACGCCGCCCCAACTGCCGCCGGGCTACGGGGGCGGGG
CGGGCGCAGGACCCGGAGGACCTCTGACCGGTCCGGGCTGTCTGCCACCC
TTCAAGCTGGACGCGGCCACCAGTCTGTTCAGCGCCGGCTGTTACCTGCA
GAGCTTCAGCAACCTGAAGGAGATGTCGCAGCAGTTTCCCATCCAGCCGA
TTGTCCTGCGTCCGCATCCGCAGCTGCCGCAGTCGCTGGCACTGAACGGC
GCATCCGGCGGACCGCCACTGCATCACCCGGCCTACGCGGCTGCCTACAG
TGTGGAGTGCGTTCCAGGTGGTCATGGACCACCGCATCCGCCGCCGAAGC
TGAGGATAAACTCCCCGGAGAAGCTCAACTCCACGGCAGTGGCGGCGGCA
GCATCCGTCGGAGGAGGAGGTGGCAACCAACACCATGAGCCCACCACGAC
CGGCTACCATCACAGTGGCCAACTGATGCTGCATCGGCCCTTCTCCACGT
CGCCGGAGCTGAAGCACAGTGCTCCCGAGATCACAGCAAGCTTTCTAGAC
C
MXO01036.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:20:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18455-PA | 1464 | Optix-RA | 685..1461 | 9..785 | 3835 | 99.7 | Plus |
CG18455-PB | 780 | Optix-RB | 1..777 | 9..785 | 3835 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Optix-RC | 2668 | CG18455-RC | 1360..2136 | 9..785 | 3855 | 99.7 | Plus |
Optix-RB | 1470 | CG18455-RB | 162..938 | 9..785 | 3855 | 99.7 | Plus |
Optix-RA | 2358 | CG18455-RA | 1050..1826 | 9..785 | 3855 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8041221..8041997 | 9..785 | 3855 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:05:06 has no hits.
MXO01036.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:24:04 Download gff for
MXO01036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Optix-PB | 1..780 | 9..788 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:14:41 Download gff for
MXO01036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18455-PB | 1..780 | 9..788 | 99 | | Plus |
Sim4 to dmel-all-transcript-r4.3.fasta performed 2006-07-14 13:27:43 Download gff for
MXO01036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18455-RB | 69..855 | 1..785 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:26:24 Download gff for
MXO01036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Optix-RA | 1040..1826 | 1..785 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:52 Download gff for
MXO01036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Optix-RA | 1040..1826 | 1..785 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:52 Download gff for
MXO01036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8041211..8041997 | 1..785 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:26:24 Download gff for
MXO01036.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3928716..3929502 | 1..785 | 99 | | Plus |