Clone MXO01042 Report

Search the DGRC for MXO01042

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:10
Well:42
Vector:pMK33-CTAP-BD
Associated Gene/TranscriptCG8813-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO01042.5prime Sequence

606 bp (27 high quality bases) assembled on 2010-12-10

> MXO01042.5prime
CAATCCACTTGATGCTATCAACCTATCAGGACGACTATGTCCCGCCCAGT
GCCAAATGGTACTAGTTTCTAACGCGGCCCAGGGGCGCCGAGGCTCACAG
TGTTCCGCAAGTCAAGGAGTGCGAATGGGACCACGAGTCCAAGATCATGA
TGCCGCCTAACGCTGCTAATGACTGTGGCGGCGTGTAGTGTACTGTCATA
CCGCCAATGGGAAAGCTGGTGGATCCGCGTATCATACCCACCCAGATGAC
TCAAGACCAGGTGGACAAGATGGCCTTCTCCACGGAAACATATTGCTTTA
AGCTGCAACCCAGACCGCTTTCTCAAGATCTTACGTACAGTCTACCCGGA
TCTGTATGAACGCCTGAAGGTCATGCGCAAGGAGGAGCTGAGCCGCGGGC
TGGAGACCAACCGTATGAACACCACCTATCATATCTATTATTGTAACATG
AACGAGTACCCGGAGGGATATTTATGACAGCCTAAATACGGATGACGAGT
ACGACAACGCCCACAAGCTGATGATTGAACGTGAACCCTGCAACGAGTTC
CACTCTAACGTGATGAACGAACTGGAGCGTGAGGCGTCCGCTGGCTACGA
GATGTC

MXO01042.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-29 13:07:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG8813-RA 998 CG8813-RA 96..690 10..606 2335 93 Plus
Blast to na_all.dmel.RELEASE6 performed 2015-01-29 13:07:12
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2869747..2870341 10..606 2285 93 Plus
Blast to na_te.dros performed on 2015-01-29 13:07:17 has no hits.

MXO01042.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:44:34 Download gff for MXO01042.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8813-RA 87..690 1..606 92   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:08:58 Download gff for MXO01042.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8813-RA 87..690 1..606 92   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-29 14:13:04 Download gff for MXO01042.5prime
Subject Subject Range Query Range Percent Splice Strand
CG8813-RA 87..690 1..606 92   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-29 14:13:04 Download gff for MXO01042.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 2869738..2870341 1..606 92   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:08:58 Download gff for MXO01042.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2869738..2870341 1..606 92   Plus