MXO01054.5prime Sequence
854 bp (786 high quality bases) assembled on 2006-12-21
> MXO01054.5prime
CAGTCGACATGGATTCTGTGACAAGTGAACAGAGTGAAAATAACAACAAT
AAAGCGGGCGCAATAAATAACAATATTAATAGTGGTATTGAAAGAGCCGC
GGGCAATATGAACACCACCGCCATGTTGATGCATCACCAGCAGCAGCAGC
AGGCAGCCGCAGCAGCGGCAGCCGCAGCAGCCCAGCAGCAACAGCAGCAG
CACAATGGACGCGACGGTAGCAACAGTTCGCGTGGAGCCAACGAGGATCG
TCCAAATGGACGGAGCTCGCACACAGGACGAGGATCCAGTTGCTCACCGG
CCAGTTCACCAAGTCGCCATCCCAGTGCCGTCAGTCCGGTGAGCTCCCTC
AACCACTCCATGATGCAGCAGATGCAGCAACAGCAGCAACAACAGCAGCA
GCAACAGCAGCAGCAGCAACACCATCAGCTCAGCCCCCCGCCACATGGAA
TGCCATCGGGCAACGGACTGCCGACGGGCCTACCGCCCAGAATGCCCCAT
GGACTGCCGCCCCATTCGCTGGGGCTCCTCAACTCCCTGCAGATGATGCA
CCATGCCTCCCCCTTGGAACTGATGGCCGCCGCCCATCACCATGTGCCTC
CAAGGTCGTACAACTCACCGCCGCCGATCTCCACCTCGGATCCCAGTGCC
AATGAGTGCAAGCTGGTGGAGTACCGGGGTCAGAAGGTCGCCGCATTCAT
AATTAGCAACGAAACGATGCTCTGCCTGCCGCAGGCCTTCGAGCTCTTCC
TGAAGCACTTGGTCGGCGGTCTGCATACGGTTTATACCAAACTAAAGCGC
CTTGACATCGTACCGCTCGTCTGCAATGTGGAACAGGTGCGCATATTACG
CGGC
MXO01054.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:20:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4952-PE | 3246 | dac-RE | 1..846 | 9..854 | 4205 | 99.8 | Plus |
CG4952-PD | 3225 | dac-RD | 1..846 | 9..854 | 4205 | 99.8 | Plus |
CG4952-PA | 3219 | dac-RA | 1..846 | 9..854 | 4205 | 99.8 | Plus |
CG4952-PB | 3246 | dac-RB | 1..846 | 9..854 | 4205 | 99.8 | Plus |
CG4952-PF | 3219 | dac-RF | 1..846 | 9..854 | 4205 | 99.8 | Plus |
CG4952-PG | 3192 | dac-RG | 1..846 | 9..854 | 4205 | 99.8 | Plus |
CG4952-PC | 3198 | dac-RC | 1..846 | 9..854 | 4205 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dac-RC | 4934 | CG4952-RC | 628..1473 | 9..854 | 4215 | 99.9 | Plus |
dac-RG | 4928 | CG4952-RG | 628..1473 | 9..854 | 4215 | 99.9 | Plus |
dac-RF | 4955 | CG4952-RF | 628..1473 | 9..854 | 4215 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 16483897..16484742 | 854..9 | 4215 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:59:44 has no hits.
MXO01054.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:24:31 Download gff for
MXO01054.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4952-PA | 1..846 | 9..854 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:14:48 Download gff for
MXO01054.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4952-PC | 1..846 | 9..854 | 99 | | Plus |
Sim4 to dmel-all-transcript-r4.3.fasta performed 2006-07-14 13:28:15 Download gff for
MXO01054.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4952-RA | 611..1459 | 2..854 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:22:01 Download gff for
MXO01054.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dac-RF | 625..1473 | 2..854 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:33 Download gff for
MXO01054.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
dac-RF | 625..1473 | 2..854 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:33 Download gff for
MXO01054.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 16483897..16484745 | 2..854 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:22:01 Download gff for
MXO01054.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 16483897..16484745 | 2..854 | 99 | | Minus |