MXO01062.5prime Sequence
861 bp (820 high quality bases) assembled on 2006-12-21
> MXO01062.5prime
CAGTCGACATGGCGGAAATATGCCGAGTTTGTATGGATATTTCTGGTAAA
CTCGTTAACATATTTGACGCCAGACGAAGAACCAGAGTTTCCATTGCCGA
GATGATCGCGCAGTGCACCGGATTCGAGGTCAAACGTGGCGATTTGTTTT
CGGAAATGATATGCCCACAGTGCTATGAGGACGTAAAGAGCGCGTATGGG
ATAAGGCAAACTTGTGAGGAAAGCCACCAGTTCTACTGCCGAGTTCGCGA
TGAAGGCATCGAGGATGCTTTATGCGCCTTGCTCGAAGAAGAAGACTGGG
AGATTTCGGAAGACGAAGATGCGCGGATTGATTCTGCATCCGCTGCTGAT
GACGATGGGAAAAGCGACAGCAAGAAGGTAGCATTCGAATGTCGAGAATG
CCACAAGAAATACCAGCGAAAGGGAACTTTTCTGAGGCACATGCGAACAC
ACATGGACGGACAATCCTTCCCATGCCCCTACTGCAAGCGGAACTTTAGA
CTTAGAGTCACTCTCAAGGCGCACATGAAGACCCACAATGCAGCGAAACC
CTACGAGTGTTCCCACTGCGCCAAGACCTTTGCGCAGCAGTCCACTCTGC
AGTCGCATGAGCGAACTCACACTGGCGAACGACCATTCAAGTGTTCACAG
TGCTCAAAAACCTTTATTAAATCATCCGATCTCCGGCGTCACATCCGCAC
ACATGGCAGCGAGAGACCGTTCAAGTGCTCCAAGTGCACGAAAACATTTA
CGAGGAAGTTTCACCTTGATAACCATTTCCGTTCTCACACTGGTGAACGA
CCATTCAAGTGTTCCCACTGCCGCAAGGCCTTCGCTATGAAGCAGCACCT
CAAGCAGCACA
MXO01062.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:20:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15436-PA | 1041 | CG15436-RA | 1..853 | 9..861 | 4240 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15436-RA | 1411 | CG15436-RA | 182..1034 | 9..861 | 4250 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4463846..4464698 | 9..861 | 4250 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:06:58 has no hits.
MXO01062.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:24:44 Download gff for
MXO01062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15436-PA | 1..852 | 9..860 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:14:51 Download gff for
MXO01062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15436-PA | 1..852 | 9..860 | 99 | | Plus |
Sim4 to dmel-all-transcript-r4.3.fasta performed 2006-07-14 13:28:32 Download gff for
MXO01062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15436-RA | 143..1002 | 1..860 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:11 Download gff for
MXO01062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15436-RA | 174..1033 | 1..860 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:02 Download gff for
MXO01062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15436-RA | 174..1033 | 1..860 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:02 Download gff for
MXO01062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4463838..4464697 | 1..860 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:11 Download gff for
MXO01062.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4463838..4464697 | 1..860 | 99 | | Plus |
