MXO01075.5prime Sequence
873 bp (849 high quality bases) assembled on 2006-12-21
> MXO01075.5prime
CAGTCGACATGAAGTCCAATACGTACGAACTGCACAACTACGCCGATCTG
AATGACATGGCCAGAGCGACGGACTCCAAGGATTCGCGCAAAAGGAAGAC
GGCCAGTGCTCGGGGCGAGAAGTATTCCCTGCGACAGAAGCGACAAAAGA
GGGGCTCCAACGAGGATGGGGAGTCAGCCAACCTGGCTGACTTTCAACTA
GAATTAGATCCCATAGCGGAGCCGGCTAGTAAATCGAGGAAAAATGCACC
CACCAAGTCCAAGACGAAAGCACCGCCACTGAGTAAATACCGTCGGAAAA
CAGCGAATGCCAGGGAGCGAACCAGAATGCGTGAGATCAACACGGCCTTT
GAGACACTGAGGCATTGTGTTCCCGAAGCGATCAAGGGCGAGGATGCGGC
CAATACCAACGAGAAGCTGACCAAAATCACCACCCTGAGACTGGCCATGA
AGTACATCACCATGCTGACCGACTCGATTCGAGATCCCAGCTATGAAAGC
GAATTTATAGGGGAGTGTCTGGAGGAGAGTGCCAATCGGGAGGCGAGAGT
GGACTTGGAAGCGAACGAGGAAGCCGAGGTGGAGCTACCCGTTCCAGTTG
CCAAGAAGCCAGCCAAGACAAAGGGCAGTGGTAAGAAGAGTTCCGCCGCG
AGCAAAAGACAGAGCCAAAAGCAGGCCAAGATAGTGCCCCAGATACCACC
GATAAGTTCCGGTGAGTCGTGCTACGCCACCTCTTCGATTGGATCGCCTG
CCTCCTCCGCCTACGCATCGCTCTCCTCGTCATCGAACAGCCACAGCAGC
AGTAGCAGTCCGGGACTGGAGCTGGACAGTCTGGTGGGATTGAACGGAAT
CAGCGCCCTGGACTCTCTGCTTC
MXO01075.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:21:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5441-PA | 1155 | dei-RA | 1..865 | 9..873 | 4325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:09:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tx-RB | 2411 | CG5441-RB | 960..1824 | 9..873 | 4325 | 100 | Plus |
| tx-RA | 1652 | CG5441-RA | 201..1065 | 9..873 | 4325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:09:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26447540..26448404 | 9..873 | 4325 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:09:21 has no hits.
MXO01075.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:25:05 Download gff for
MXO01075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dei-PA | 1..865 | 9..873 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:14:56 Download gff for
MXO01075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5441-PA | 1..865 | 9..873 | 100 | | Plus |
Sim4 to dmel-all-transcript-r4.3.fasta performed 2006-07-14 13:28:58 Download gff for
MXO01075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5441-RA | 411..1275 | 9..873 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:53 Download gff for
MXO01075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tx-RA | 542..1406 | 9..873 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:43:24 Download gff for
MXO01075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tx-RA | 201..1065 | 9..873 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:43:24 Download gff for
MXO01075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26447533..26448404 | 1..873 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:53 Download gff for
MXO01075.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22273255..22274126 | 1..873 | 99 | | Plus |
