MXO01076.5prime Sequence
687 bp (18 high quality bases) assembled on 2010-12-10
> MXO01076.5prime
CAATCCACTTGTATATATCACTTCCTATGGCGTGGCGCCTAGAGAGCACT
GATTCCTAGGATGACTCCTCGGAGGTCGATATCATGGAGGATATTCCGAA
ATCGGCGGAGGTATCGGGATCGGAATTGACCACGGAACCCATGGTCTTCT
TGCAGGGATTAAACTCCGGGAATCTGATGCTCTTGACCCTTTTTTCCGTG
CTGCTCGAAATGATGCTGCAGGACATTCAGATCCAAGGGAACACGCTGCC
CAAGCTAGACAATCACAACATCGGTGGTTATTGCTTCTGCATGGTTCTGG
ATGAGCCGCCCAAGTCTCTTTGGATGGACTCGATTCCTCTGAATTTGCTC
TACGTCCGGATGAACAAGGCCTTCGACGTGGACGTTCAGTTCAAGTCTAA
AATGCCCATCCAACCACTTAATTTGCGTGTGTTCCTTTGCTTCTCCTATG
ATGTGAGTGCTCCCGAGGTCCGCTGTCCCAATCTCCTTAGCGTTGAGCCT
TTGACGGCCAATAACGCTNAACTGCGCGAGAGCTTGCTGCGCAGCGAGAA
TCCCAACAGTGTATATTGTGGAAATGCTCAGGGCAAGGGAATTTCCGAGC
GTTTTTCCGTTGTATTCCCCCTGAACATGAGCCGGTCTGTAACCCGCAGT
GTTCTCACGCGCCAGACCCTGGACTTCAAGTTCGTCT
MXO01076.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-01-29 13:07:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| p53-RC | 2095 | CG33336-RC | 631..1308 | 10..687 | 2689 | 93.1 | Plus |
| p53-RA | 1577 | CG33336-RA | 113..790 | 10..687 | 2689 | 93.1 | Plus |
| p53-RB | 1870 | CG33336-RB | 442..1083 | 46..687 | 2629 | 93.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-01-29 13:06:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23050815..23051121 | 501..195 | 1280 | 94.5 | Minus |
| 3R | 32079331 | 3R | 23050565..23050750 | 687..502 | 829 | 96.2 | Minus |
| 3R | 32079331 | 3R | 23053118..23053201 | 128..45 | 345 | 94 | Minus |
Blast to na_te.dros performed on 2015-01-29 13:07:03 has no hits.
MXO01076.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:44:33 Download gff for
MXO01076.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| p53-RC | 631..1308 | 10..687 | 93 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:08:55 Download gff for
MXO01076.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| p53-RA | 113..790 | 10..687 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-01-29 14:13:01 Download gff for
MXO01076.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| p53-RA | 113..790 | 10..687 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-01-29 14:13:01 Download gff for
MXO01076.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23050565..23050750 | 502..687 | 96 | <- | Minus |
| 3R | 23050815..23051124 | 195..501 | 93 | <- | Minus |
| 3R | 23052918..23052948 | 165..194 | 70 | <- | Minus |
| 3R | 23053012..23053048 | 128..164 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:08:55 Download gff for
MXO01076.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18876287..18876472 | 502..687 | 96 | <- | Minus |
| arm_3R | 18876537..18876846 | 195..501 | 93 | <- | Minus |
| arm_3R | 18878640..18878670 | 165..194 | 70 | <- | Minus |
| arm_3R | 18878734..18878770 | 128..164 | 97 | <- | Minus |
