MXO01078.5prime Sequence
900 bp (831 high quality bases) assembled on 2006-12-21
> MXO01078.5prime
CAGTCGACATGGCCGCCAACTACAAAAGCTGCCCGCTAAAGAAGCGCCCC
ATTGTCTTCGTGGAGGAGCGTCTGCCACAAACGGAGGCCTTGGCCCTGAC
CAAGGACTCACAGTTTGCCCAGGATCAGCCGCAGGATCTATCCCTGAAAC
GGGGTCGCGACGAGGAGACCCAGGATTATCAGCAGCCGGAACCGAAACGT
GACTATGTGCTGAACCTTTCAAAAACACCGGAAAGGAACTCCAGCTCTAG
CTCCAACTCCTGCCTGCTGTCGCCGCCAGTGGAGGCCCAGGATTACCTGC
CCACCGAAATCCATATGCGTGGACTAACGGCAGGAACAACGGGATATACC
ACCGCCACCCCCACCACGATTAATCCCTTCCAGTCCGCCTTTGTGATGGC
CGCCGGTTGCAATCCGATCTCTGCCCTGTGGAGCAGCTATCAGCCCCATC
TGGCCGCCTTCCCCTCGCCAGCCAGCTCGATGGCCTCGCCCCAGTCGGTC
TACAGCTACCAGCAGATGACGCCGCCCTCCAGCCCCGGATCCGATCTGGA
AACCGGTTCCGAGCCAGAGGATCTTTCAGTGCGAAATGACATCCCACTGC
CGGCTCTGTTCCACCTTTTCGATGAGGCCAAGTCCAGCAGCAGCGGTGCC
AGTGTAAGCAGCTCATCGGGATACTCCTACACTCCGGCCATGAGTGCCTC
GTCGGCGAGTGTTGCCGCCAATCATGCCAAAAACTACCGCTTCAAGTGCG
ACGAGTGCCAGAAGATGTACTCCACCTCGATGGGCCTGTCCAAGCACCGT
CAGTTCCACTGCCCGGCAGCCGAGTGTAATCAGGAGAAGAAGACCCACTC
CTGCGAGGAGTGTGGAAAGCTGTACACCACCATTGGAGCCCTGAAGATGC
MXO01078.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:21:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3956-PA | 1173 | sna-RA | 1..892 | 9..900 | 4460 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sna-RA | 1668 | CG3956-RA | 154..1045 | 9..900 | 4460 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15477216..15478107 | 900..9 | 4460 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:00:34 has no hits.
MXO01078.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:25:08 Download gff for
MXO01078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sna-PA | 1..892 | 9..900 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:14:56 Download gff for
MXO01078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3956-PA | 1..892 | 9..900 | 100 | | Plus |
Sim4 to dmel-all-transcript-r4.3.fasta performed 2006-07-14 13:29:02 Download gff for
MXO01078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3956-RA | 155..1054 | 1..900 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:22:34 Download gff for
MXO01078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sna-RA | 146..1045 | 1..900 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:01 Download gff for
MXO01078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sna-RA | 146..1045 | 1..900 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:01 Download gff for
MXO01078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15477216..15478115 | 1..900 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:22:34 Download gff for
MXO01078.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15477216..15478115 | 1..900 | 99 | | Minus |
