MXO01082.5prime Sequence
887 bp (788 high quality bases) assembled on 2006-12-21
> MXO01082.5prime
CAGTCGACATGGCCGCCTGCTACAATGCCTATAGCGCTGGATCACAGTCC
TTCGAGTTCGACGAGGACGACGACGACGCCTCCTTCGACAGTGGCTACGA
GAAGAGTTTCGAGACGGAGGCCCAGTTGAGCTCACGACGCCGCTTGGACT
TTGGCACTCCGCCGACTCCGGCGATCCCGCAACCGTACTCCGGCGGCACC
TGGGACGCCGTACCGCTCAGCTCACCGCCGGCGGGCTTCGTGGGATTGCT
CGATACGAGCAGCAATCACAGCACTCGGAGCGGCAGGACACTGGTCGAAC
ATCTGAACAGTCGGGCCACGAATGGCGTCTTCGATCCGCCATTGACCAGT
ACGCCGGTGAAGTCGCCAGAGGATCCCAATGCGCCGCGACCGAAACGCAA
ATATGCCGTCGGCAAGAACAGAGTAACTCGCTCGCGCAGTCCAACCCAAG
TGGTGAAGATCAAGCGTTTCCGCCGCATGAAGGCCAATGACCGGGAGCGG
AATCGGATGCATAACTTGAATGATGCCCTGGAGAAACTACGCGTCACTCT
GCCCTCGCTTCCCGAGGAGACGAAGCTGACGAAGATCGAGATTCTGCGAT
TTGCGCACAACTACATCTTTGCCCTGGAGCAGGTGCTGGAAAGCGGAGGT
TCAATCAACCTGGATCTGGAGAAGCTGCAGAACTTCACGCTGAGTGGTGA
GAGGATTACCAAGGAGCTCTTCGATGCTCTTTTCGTGAATCCACAGCCGT
ATCCCTTGTTCGGACGAATGTTCCCCTATGGACAGGGAATGGCGCCTCTT
GCACAGCACCAGACTGCTCCAGCATCGCACGCGGAGCAGCCGCCGGCGAT
GGGTGGCTTTCAGCACGGCATGGACTATCCGCAGCAG
MXO01082.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:21:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7659-PA | 1197 | tap-RA | 1..879 | 9..887 | 4395 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:09:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tap-RA | 2130 | CG7659-RA | 111..990 | 8..887 | 4400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:09:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17359792..17360671 | 8..887 | 4400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:09:10 has no hits.
MXO01082.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:25:16 Download gff for
MXO01082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tap-PA | 1..879 | 9..887 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:14:58 Download gff for
MXO01082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7659-PA | 1..879 | 9..887 | 100 | | Plus |
Sim4 to dmel-all-transcript-r4.3.fasta performed 2006-07-14 13:29:10 Download gff for
MXO01082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7659-RA | 137..1022 | 1..887 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:45 Download gff for
MXO01082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tap-RA | 105..990 | 1..887 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:43:16 Download gff for
MXO01082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tap-RA | 105..990 | 1..887 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:43:16 Download gff for
MXO01082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17359786..17360671 | 1..887 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:45 Download gff for
MXO01082.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17352886..17353771 | 1..887 | 99 | | Plus |
