MXO01095.5prime Sequence
860 bp (818 high quality bases) assembled on 2006-12-21
> MXO01095.5prime
CAGTCGACATGTTCGACGAGCCCATAATCTCCAGCTTCGTTTTTACCAAC
GAGGAGACCACGCAGACATTCCACCACCAGTGGTTTTCCCAGGGCCAGTT
ACACGAATGTGCCACCTGCTACAGCTCCATCGACGCAGATGAGCCGCCCT
CCCAGCATTGGCTGCGGGGAGGAGAAGCATCACAGGGCTTGCATCTTACC
AAGCAACAGCAGGCCGTTATGGATATTATCGAGGCCCGCCAGATCGAGAC
TTTCTTCTTCTGCGACGAGAGTTCCAAGGACAAGCTGGAACACTTCATGG
GCGAGACCTGTGCGAGGGGAATCCCCGAGCTTCTCCGCTGGATGTTCCAG
AACAACACCGTGGCCGTGGAGTTCAATCTGGCCTGCTACGTGAACGCCAT
GGACCAGGTGTTGATCTTTCAGAGCGGCTCGCTGAGGGCGGACCACCACT
ACGACGTAGACGAATCCGTGGGCGTGGTCTACGAGATGCTTATGCAGAGG
ATTGAAAACTACCTCAACTGCAGCAGCGAGTACGGCATGGCAGAGTGCAG
CATCACCAGATTGAAAGTACAGGTGAAGAGGATTAGGGTGGAGGCGGACG
GTCAGTCAGCGGACTCGTCCGTCTTCGCCCTACCCCTGCAGCTTCAGGAG
GAGGAGGGCCTGACCGCCACTACCGGCTGCTCCACCAGCGAGGCAGAGCT
TGCCAGTCTGCGCTCCGCCTACCTGAAGCACTTCCGCGAGTGCAACGGCT
ACTTCCCGCCCAACATGCGCGTCAATCTCTACGGACTGCAGCAGTGCAAG
ACCACCAAGGAGCTGTATGTGGTGCCCTATCATATCAGCGAAACCCTCCA
GCAGCTGCCC
MXO01095.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-07 22:21:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4216-PA | 1287 | term-RA | 1..852 | 9..860 | 4260 | 100 | Plus |
| CG7271-PA | 1284 | CG7271-RA | 19..849 | 30..860 | 3980 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| term-RA | 1469 | CG4216-RA | 160..1012 | 8..860 | 4265 | 100 | Plus |
| CG7271-RA | 1407 | CG7271-RA | 100..949 | 8..860 | 4105 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18592760..18593612 | 860..8 | 4265 | 100 | Minus |
| 3L | 28110227 | 3L | 18588858..18589707 | 8..860 | 4080 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:46:42 has no hits.
MXO01095.5prime Sim4 Records
Sim4 to dmel-all-CDS-r4.3.fasta performed 2007-01-21 20:25:32 Download gff for
MXO01095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| term-PA | 1..852 | 9..860 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:02 Download gff for
MXO01095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4216-PA | 1..852 | 9..860 | 100 | | Plus |
Sim4 to dmel-all-transcript-r4.3.fasta performed 2006-07-14 13:29:32 Download gff for
MXO01095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4216-RA | 148..1006 | 1..860 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:51 Download gff for
MXO01095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| term-RA | 154..1012 | 1..860 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:57 Download gff for
MXO01095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| term-RA | 154..1012 | 1..860 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:57 Download gff for
MXO01095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18592760..18593616 | 1..860 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:51 Download gff for
MXO01095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18585860..18586716 | 1..860 | 99 | | Minus |
