MXO01312.3prime Sequence
815 bp (679 high quality bases) assembled on 2007-03-15
> MXO01312.3prime
ATGGTCTAGAAAGCTTGCGAACGTTGTCAAAGCGCCCGCGCCCAGACCGT
AGCCCACTCCCTTGGGTCCAAAATTGCGGCCGTAGCAGGCTCGGCAGTAG
ATATCGCCGTCGGGTCCATCGTTCAGGTTGGTCGAGTCCAGCGATTTGCG
GCAATCCGAGCAGTAGAAGCACCTCTTGTGCCAGATCCTGGTCTTGCTGA
TCATCTGCTCGGCGGCGAACACGGCGAAACCGCAACGCGGGCAGCCGCCC
GAAGTCTTGGGTCCGGCCAGAGGACGGCCATCTGGGAACTGGATGGTGCT
CTCGCCACTGGTTGACACTAGAGTGGGGGCGTGGCCGTAACCAAAGCCCT
TGGGGCCGAAGAGCTTGCCGTAGCAGGCGCGGCAGTGGATGTCGCCATCG
GGTCCATCGCAGGCCAGGACCGAGTCCAATGGCCGGTGGCAGTCGGCGCA
GTTGTAGCACTTCTTGTGCCACACCTTGCCCTTGGACAGCTGTTGCTCGG
CGGCGAATACGGCTCCTCCGCACCGGGGACAGCCTTCGCCGTCACGGGCC
TTAATTGACGTGGTGTCCGGGTTATAGAAGGGCCTGTTGGCGCTGATCTG
ATCCTCGGTCAAGCCATCGGTCTGCAGGAAACCAGAGCCGCATGCGAATC
CATAGCCATGTGGTCCCCACTTCTTGCCGTAGCAAGTGCGGCAGTACACA
TCACGATCGGGACCATCACTGGCATTGATCGAGTCCAGAGTCTTGTGGCA
ATCCTTGCAGTTGAAGCACTTCTTGTGCCACTCCCGAACCTTGGAAAGCT
TCTGCTCCGCTGCGT
MXO01312.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:04:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1019-PA | 1488 | Mlp84B-RA | 689..1485 | 815..19 | 3935 | 99.7 | Minus |
CG1019-PB | 1488 | Mlp84B-RB | 689..1485 | 815..19 | 3935 | 99.7 | Minus |
CG30174-PA | 513 | CG30174-RA | 430..473 | 687..644 | 145 | 93.1 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mlp84B-RC | 3071 | CG1019-RC | 850..1646 | 815..19 | 3955 | 99.7 | Minus |
Mlp84B-RB | 2382 | CG1019-RB | 833..1629 | 815..19 | 3955 | 99.7 | Minus |
Mlp84B-RA | 2399 | CG1019-RA | 850..1646 | 815..19 | 3955 | 99.7 | Minus |
Mlp84B-RC | 3071 | CG1019-RC | 805..992 | 551..364 | 220 | 74.5 | Minus |
Mlp84B-RB | 2382 | CG1019-RB | 788..975 | 551..364 | 220 | 74.5 | Minus |
Mlp84B-RC | 3071 | CG1019-RC | 1160..1301 | 814..673 | 185 | 75.4 | Minus |
Mlp84B-RB | 2382 | CG1019-RB | 1143..1284 | 814..673 | 185 | 75.4 | Minus |
Mlp84B-RC | 3071 | CG1019-RC | 885..989 | 183..79 | 180 | 78.1 | Minus |
Mlp84B-RB | 2382 | CG1019-RB | 868..972 | 183..79 | 180 | 78.1 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7114275..7115071 | 19..815 | 3955 | 99.7 | Plus |
2R | 25286936 | 2R | 24077095..24077356 | 570..309 | 410 | 77.1 | Minus |
2R | 25286936 | 2R | 24076778..24076945 | 780..613 | 300 | 78.6 | Minus |
2R | 25286936 | 2R | 24077477..24077677 | 247..47 | 255 | 75.1 | Minus |
3R | 32079331 | 3R | 7114929..7115116 | 364..551 | 220 | 74.5 | Plus |
3R | 32079331 | 3R | 7114620..7114761 | 673..814 | 185 | 75.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:11:54 has no hits.
MXO01312.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:12 Download gff for
MXO01312.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1019-PB | 689..1488 | 15..815 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:40 Download gff for
MXO01312.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp84B-RA | 850..1649 | 15..815 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:33 Download gff for
MXO01312.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp84B-RA | 850..1649 | 15..815 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:33 Download gff for
MXO01312.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7114271..7115071 | 15..815 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:40 Download gff for
MXO01312.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2939993..2940793 | 15..815 | 99 | | Plus |
MXO01312.5prime Sequence
717 bp (643 high quality bases) assembled on 2007-03-15
> MXO01312.5prime
CAGTCGACATGCCTTCCTTCCAACCGATCGAGGCCCCCAAGTGTCCGCGC
TGCGGCAAGAGTGTCTACGCTGCCGAAGAGCGTCTGGCTGGCGGCTATGT
ATTCCACAAGAACTGCTTCAAGTGCGGAATGTGCAACAAATCCCTGGACT
CCACCAACTGCACAGAGCACGAGCGCGAGCTCTACTGCAAGACGTGCCAC
GGTCGCAAGTTCGGGCCGAAAGGTTACGGCTTCGGCACTGGAGCTGGCAC
CCTCTCCATGGACAACGGGTCACAGTTCCTGCGCGAGAACGGCGATGTGC
CGTCCGTAAGGAATGGAGCCCGCCTGGAACCCAGGGCTATTGCTCGTGCC
CCCGAAGGTGAGGGCTGTCCTCGTTGCGGTGGCTATGTGTACGCCGCCGA
ACAGATGTTAGCCCGCGGTCGCAGCTGGCACAAGGAGTGCTTCAAGTGCG
GTACCTGCAAGAAGGGTCTGGACTCGATCCTGTGCTGCGAGGCTCCGGAC
AAGAACATCTACTGCAAGGGCTGCTATGCCAAGAAGTTTGGACCCAAGGG
CTATGGTTATGGCCAGGGCGGTGGTGCTCTCCAGTCCGACTGCTATGCTC
ACGACGACGGAGCACCGCAAATCCGTGCCGCCATTGATGTGGACAAGATC
CAGGCCCGTCCGGGTGAGGGTTGCCCACGTTGCGGCGGTGTGGTCTACGC
AGCGGAGCAGAAGCTTT
MXO01312.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:04:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1019-PA | 1488 | Mlp84B-RA | 1..709 | 9..717 | 3545 | 100 | Plus |
CG1019-PB | 1488 | Mlp84B-RB | 1..709 | 9..717 | 3545 | 100 | Plus |
CG33149-PA | 279 | Mlp60A-RA | 90..162 | 101..173 | 190 | 90.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mlp84B-RC | 3071 | CG1019-RC | 162..870 | 9..717 | 3545 | 100 | Plus |
Mlp84B-RB | 2382 | CG1019-RB | 145..853 | 9..717 | 3545 | 100 | Plus |
Mlp84B-RA | 2399 | CG1019-RA | 162..870 | 9..717 | 3545 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7115051..7115759 | 717..9 | 3545 | 100 | Minus |
2R | 25286936 | 2R | 24075451..24075586 | 129..264 | 245 | 78.7 | Plus |
2R | 25286936 | 2R | 24075245..24075336 | 34..125 | 190 | 80.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:05:14 has no hits.
MXO01312.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:12 Download gff for
MXO01312.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1019-PB | 1..709 | 9..717 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:52 Download gff for
MXO01312.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp84B-RA | 154..870 | 1..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:41:08 Download gff for
MXO01312.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp84B-RA | 154..870 | 1..717 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:41:08 Download gff for
MXO01312.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7115051..7115767 | 1..717 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:52 Download gff for
MXO01312.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2940773..2941489 | 1..717 | 99 | | Minus |