MXO01325.3prime Sequence
854 bp (766 high quality bases) assembled on 2007-03-15
> MXO01325.3prime
ATGGTCTAGAAAGCTTGCTACAACGGTGATTTGTTGGTCTTGTGGGATCT
GGCTCTGCCCGGATTAACCTTGCACTTAAGCTGTGCAATAAGGTCGGAAA
TTTTCAGTGCTGGGCCCACCTTCATGCCCAACAGTGGCATGATATCGTCC
TTGGTCAGCTGCAGGAGTCGCTTTCCGTCGATCTTGTTCCGGCTGAACGT
GTCACAGTGGGCTGTGCAATCGTTCACCCGCAAGAACTGGGATACGTCGT
ACACGTTCCATGTATCCGGCACCAGCTCCAAGTGAGGTTCACTCGAATCG
ATGTCGGCCAGACGCGGAATGTACTTATTATTCGTCGCAGAGGAGTTCGT
TTTGTTACTGCCCGTGGCGAGAGTTACCATCGAGCCCCACCCACTTCCAC
TGCCCGATCCAGCGATCAGATCACTGGACGACTGTGTCGTTGACTGCTCG
GAGATGTGGCTGGTGCTTCCGTCTCCATCGCCATCCGCATCGGGATCCTC
CTCGTCGCCTTCCTCCTCGGGCTGATTGTTCTCGTAAAAGGCAGCATTGT
GATGCTCCGGCTTTAGCTCCAGCTTGATGCTCAGCTTGGGTAAGTGCGGC
GTGGTCTTGAGCGCAATTGTACGCGATTTGACCGACTGAGTATTATTATC
GGTTGGAGTTTTGCCTCCCGCTGCTCCCTTTTTGGGCTTTCGCTTTCGCT
GTATTTTGGGCTTTGGTGCCGGTTTCGGGGCCTGCTGATGTGCTACTCTC
GGTGGGCCCTCTAGCTTATGGTTGAACAGTACACACCATCCGACTGGATA
TATATCGGCTGATTCGCATCCAACCACTGGTCGTACTCATCCGTCCATCC
GTCA
MXO01325.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:04:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16975-PA | 2607 | CG16975-RA | 1804..2233 | 818..389 | 2125 | 99.7 | Minus |
CG16975-PB | 3663 | CG16975-RB | 2860..3289 | 818..389 | 2125 | 99.7 | Minus |
CG16975-PA | 2607 | CG16975-RA | 2243..2600 | 379..22 | 1790 | 100 | Minus |
CG16975-PB | 3663 | CG16975-RB | 3299..3656 | 379..22 | 1790 | 100 | Minus |
CG16975-PA | 2607 | CG16975-RA | 1767..1803 | 854..818 | 185 | 100 | Minus |
CG16975-PB | 3663 | CG16975-RB | 2823..2859 | 854..818 | 185 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfmbt-RD | 4765 | CG16975-RD | 3122..3955 | 854..22 | 4070 | 99.3 | Minus |
Sfmbt-RB | 4777 | CG16975-RB | 3134..3967 | 854..22 | 4070 | 99.3 | Minus |
Sfmbt-RA | 3939 | CG16975-RA | 2296..3129 | 854..22 | 4070 | 99.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13170459..13170785 | 22..348 | 1635 | 100 | Plus |
2L | 23513712 | 2L | 13171382..13171666 | 348..632 | 1365 | 98.6 | Plus |
2L | 23513712 | 2L | 13171739..13171962 | 632..854 | 1055 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:12:08 has no hits.
MXO01325.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:21 Download gff for
MXO01325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16975-PB | 2824..3663 | 18..853 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:45 Download gff for
MXO01325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfmbt-RA | 2297..3129 | 22..853 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:41 Download gff for
MXO01325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfmbt-RA | 2297..3129 | 22..853 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:41 Download gff for
MXO01325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13170459..13170784 | 22..347 | 100 | <- | Plus |
2L | 13171382..13171665 | 348..631 | 98 | <- | Plus |
2L | 13171739..13171961 | 632..853 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:45 Download gff for
MXO01325.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13170459..13170784 | 22..347 | 100 | <- | Plus |
arm_2L | 13171382..13171665 | 348..631 | 98 | <- | Plus |
arm_2L | 13171739..13171961 | 632..853 | 99 | | Plus |
MXO01325.5prime Sequence
806 bp (746 high quality bases) assembled on 2007-03-15
> MXO01325.5prime
CAGTCGACATGAACCCATCCGAGCTCCCCATGATGTGGATGAGTAGTCAG
TACAACTCGGAGCGCATTACACTGGAGGATGCGGCCACTCTGCTGGGTCA
TCCCACTGTTGGACTCTCTGTCATGGAGGACCTCTCCGCCCATCAGCCAA
CTTTGGACATGAATCCGATGATGAGCCTAATGGGGGGAGATTTCACTGGT
CAAGCGGCGGCGACTGCTGCGGCACTGGGTGTACAGCCGGGCACCCTGAT
TGCCACCAACTCGAACAACCTGTACGGATTTGCCCACATGGGCGGCCTGC
AGCAGCAACTGCTCCAGCAGTCGGCGGCGGCGGCAGTCTTCCAGAACTAT
GCGGAGGCAATGGATAACGATGTGGAGAACGGTTTGTTTCCCCCCCCCAT
GGAGGCGGTCGTGGACGATGACAACCAAGTGTACGGTCAGAGGGACAATA
ACTTTGATGATAATGGATCCGAGTTGGAGCCCAAGCAAGAGATTATCAAC
ATCGACGACTTTGTGATGATGAACGAGGACAATAATTCGTACGATGGCAC
CGACTTTATGACCTCCTCCGATAAGGACATTTCGCAGTCCTCCTCCTCCT
GCATGGCACAGATGCCCGGAAGCTTGGGCGTCCCTGGAGTCGAGCACGAT
CTTTTGGTTCCACTGCCCGATGGCCTGCTGCACCACAAGCTGCTGGGCAC
AACTCTGGTCCCTGCGATGGGTACGCTAAATGGCAATGCCTTTGGCAACA
TAATGGTCAGCACTGAAAACACATCCAGCAAGCAAATGCAGCGCACCTAT
AGTACG
MXO01325.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:04:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16975-PB | 3663 | CG16975-RB | 389..798 | 397..806 | 2025 | 99.7 | Plus |
CG16975-PB | 3663 | CG16975-RB | 1..374 | 9..382 | 1820 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:02:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfmbt-RD | 4765 | CG16975-RD | 300..1097 | 9..806 | 3810 | 98.5 | Plus |
Sfmbt-RC | 4846 | CG16975-RC | 312..1109 | 9..806 | 3810 | 98.5 | Plus |
Sfmbt-RB | 4777 | CG16975-RB | 312..1109 | 9..806 | 3810 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:02:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13174626..13175277 | 806..155 | 3110 | 98.5 | Minus |
2L | 23513712 | 2L | 13175666..13175813 | 156..9 | 710 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:02:24 has no hits.
MXO01325.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:22 Download gff for
MXO01325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16975-PB | 1..798 | 9..806 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:34 Download gff for
MXO01325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfmbt-RB | 312..1109 | 9..806 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:07 Download gff for
MXO01325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfmbt-RB | 312..1109 | 9..806 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:07 Download gff for
MXO01325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13174626..13175276 | 156..806 | 98 | <- | Minus |
2L | 13175667..13175813 | 9..155 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:34 Download gff for
MXO01325.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13174626..13175276 | 156..806 | 98 | <- | Minus |
arm_2L | 13175667..13175813 | 9..155 | 98 | | Minus |