Clone Sequence Records
MXO01327.3prime Sequence
420 bp (420 high quality bases) assembled on 2007-03-15
> MXO01327.3prime
ATGGTCTAGAAAGCTTGCGCAGCCCTCCAGCTCGCTGGGAATGGGTATCT
CGTTCTGGATGGCGAACTGCAGCAGCGCCTTGTACTTGTTCTTCCAGTTG
GACACCTCGCGGCGCACCTGCTCGTTGTCCTCGTGCATCTGCTCCAGTTC
CGTCCACTCGTACGACTTCTTAGTCTCCAGCTCGTCCTTCTGTTCGATTC
TCTTGATGCGGCAACTGGCTGCGTATCCGCGATTCTTTAAGGTTCTCCGG
CGCTGCTTCATCCGAACGATCTCCTCGCGGTTCAGGCCACGCATCTTGAG
GGTCCGATTAAGATCCCTTACCGAAATGCTCACCAAATCGTCATCGGTAA
TATCCGGAATTGGACATGGCGAAAGTGGTGTTTCCCCCCACTTTCTCTCG
CGCTTTGCTTCCATGTCAAC
MXO01327.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:04:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9954-PA | 399 | maf-S-RA | 35..396 | 380..19 | 1810 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| maf-S-RA | 631 | CG9954-RA | 111..506 | 414..19 | 1845 | 97.7 | Minus |
| maf-S-RB | 646 | CG9954-RB | 160..521 | 380..19 | 1810 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20641182..20641543 | 380..19 | 1810 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:05:26 has no hits.
MXO01327.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:24 Download gff for
MXO01327.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9954-PA | 1..399 | 16..414 | 97 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:58 Download gff for
MXO01327.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| maf-S-RA | 104..510 | 15..420 | 96 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:41:13 Download gff for
MXO01327.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| maf-S-RA | 104..510 | 15..420 | 96 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:41:13 Download gff for
MXO01327.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20641185..20641547 | 15..380 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:58 Download gff for
MXO01327.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16528690..16529052 | 15..380 | 98 | | Minus |
MXO01327.5prime Sequence
423 bp (423 high quality bases) assembled on 2007-03-15
> MXO01327.5prime
CAGTCGACATGGAAGCAAAGCGCGAGAGAAAGTCATCCCTGGCACCACTT
TCGCCATGTCCAATTCCGGATATTACCGATGACGATTTGGTGAGCATTTC
GGTAAGGGATCTTAATCGGACCCTCAAGATGCGTGGCCTGAACCGCGAGG
AGATCGTTCGGATGAAGCAGCGCCGGAGAACCTTAAAGAATCGCGGATAC
GCAGCCAGTTGCCGCATCAAGAGAATCGAACAGAAGGACGAGCTGGAGAC
TAAGAAGTCGTACGAGTGGACGGAACTGGAGCAGATGCACGAGGACAACG
AGCAGGTGCGCCGCGAGGTGTCCAACTGGAAGAACAAGTACAAGGCGCTG
CTGCAGTTCGCCATCCAGAACGAGATACCCATTCTTTTCGCCCCCCCCGG
CTGCGCAAGCTTTCTAGACCATT
MXO01327.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:04:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9954-PA | 399 | maf-S-RA | 1..376 | 9..384 | 1880 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| maf-S-RA | 631 | CG9954-RA | 111..486 | 9..384 | 1880 | 100 | Plus |
| maf-S-RB | 646 | CG9954-RB | 158..501 | 41..384 | 1720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20641180..20641523 | 41..384 | 1720 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:53:16 has no hits.
MXO01327.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:24 Download gff for
MXO01327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9954-PA | 1..382 | 9..390 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:34 Download gff for
MXO01327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| maf-S-RA | 103..492 | 1..390 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:53 Download gff for
MXO01327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| maf-S-RA | 103..492 | 1..390 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:53 Download gff for
MXO01327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20641181..20641529 | 42..390 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:34 Download gff for
MXO01327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16528686..16529034 | 42..390 | 98 | | Plus |
