MXO01331.3prime Sequence
863 bp (780 high quality bases) assembled on 2007-03-15
> MXO01331.3prime
ATGGTCTAGAAAGCTTGCGTCCAGCCACCTGGTTTGCGTGCAAGTCGACT
GAAAGTTGTCGGGGAAGAGTTCGTCCATTATTTCATCGCAGGTCTGCGTG
TGCTGCGTGTTGTACAGACCATCTGGCCAGTGAGTTTGGGTTTGGATGTG
GGACAGCCCCAGTTCCTCAAACAAATCGTCGCAAGTTTGGGTGTACATGT
GGGCAGAGGTTTGCAAGTCAAACATAGGTTCAGTTTCTGAATACGCGTGG
AAATGGCTTCCGACCGCAACAGGCTCCTGTTCCTCTGGGAAATCATCGGT
CATCGTTCCTATGTCGCCTCTGGTGTCTGGCGTTTGGGTTTCTATATCGC
GTAACAAGGGCGCCAGCACTTCGTTCCTGTTTTCTCCCCCCCCCCCCTCC
TCCGTTTGTGTTTCCATAAAAAGATTCTGGGATGACATCTCTAGCGCATA
GGACACATCCATAATGGGCAGGAAACAAAGAATATGTTCCTCTGCAGCCG
GTAAATTGGTATCCAGTTCAAGAGTGGAGGGCATATTGGCCTCCGGATTG
GGTATTTCAGCATATAGTTCAGTAACCCCCGCCAAGTTGGAAGGCAGGTT
GTTAATATATTCCTCTGACGGATGTAAATCACTGCCTGTTTTCAAACTGT
GGGCGGTTAAGGAATCTGCAGAAACGGGAATTGGCTGTGGATTCAGCCTT
TTCCATGTGGCCAGCGAGGGTATGGGAACCTTGTCGGATTCGTGATGCAC
CAAATGGTTCTTGCGCCGCATGTGGGTCCTGAGGCCAGCCTTGCTGTTGT
AAGTCAGTTCACACACTGAACACTTGTGTTTTGAGCACTGATGCTTCTCC
AGATGGTGCTGCA
MXO01331.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:04:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14962-PA | 1167 | CG14962-RA | 320..758 | 863..425 | 2145 | 99.5 | Minus |
| CG14962-PA | 1167 | CG14962-RA | 804..1164 | 379..19 | 1730 | 99.1 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:40:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Asciz-RB | 2002 | CG14962-RB | 1032..1876 | 863..19 | 3940 | 97.8 | Minus |
| Asciz-RA | 1303 | CG14962-RA | 333..1177 | 863..19 | 3940 | 97.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:40:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3163912..3164756 | 19..863 | 3940 | 97.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:40:12 has no hits.
MXO01331.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:26 Download gff for
MXO01331.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-PA | 321..1167 | 16..862 | 97 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:28 Download gff for
MXO01331.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14962-RA | 334..1183 | 14..862 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:24 Download gff for
MXO01331.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Asciz-RA | 334..1183 | 14..862 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:24 Download gff for
MXO01331.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3163906..3164755 | 14..862 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:28 Download gff for
MXO01331.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3163906..3164755 | 14..862 | 97 | | Plus |
MXO01331.5prime Sequence
704 bp (703 high quality bases) assembled on 2007-03-15
> MXO01331.5prime
CCTAAAAGGAAGTTATNAGTNGANATGGANAGNGAAAAAACCCCCAAGGA
TATTTGGGAATTAATGGNNGTTAGGGAGNANAGGTGNGAGAGATGTTGGA
GTTTTGTTTTTGGNAACCCCAGTAAGTATNAGTTGGANNTGGGAGGGNGN
NANNAGGAGGTTATNNNANGTTGTGTGATGGGGNNAATTGTNGAATTNNA
TTGNNNNGTGGAAAAGTGTATTTATAATGTGGTTANAAAGGGAGNNNGNA
GTTTNANTAGTTTGGGTTTGTTGTGANAGAATTANAAGAAGAGNNANTTG
GANAAGAATTATAAGTGTTTGGGGTGGGGNGGGAAATTNTTGTTGTTTTT
TTATTTGGAGAAGNATNAGTGTTTAAAAGAGAAGTGTAAAGTGTGTGATT
TTTTTTCCCCCCCCCCGGNTGGNNTNAGGATTTAAAAAAAAAAAAAGAGG
GGTTTGGTGNATNANGAATNNGAAAAGGTTNNNATANNTTNGNTGGNTAN
ATGGAAAAGGTTGAATNNANAGNNAATTTNTGTTTNTGNAGATTNTTTAA
NNGNTTANAGTTTGAAAATAGGTAGTGATTTATATNTGTNAGAGGAATAT
ATTAATAATTTGGTTTNTAAGTTGGNGGGGGTTANTGAANTATATGTTGA
AATANNNAATNNGGAGGNNAATATGNNNTNNANTTTTGAANTGGATATNA
ATTT
MXO01331.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-11 12:04:55 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:09:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Asciz-RB | 2002 | CG14962-RB | 736..1086 | 48..398 | 416 | 71.2 | Plus |
| Asciz-RA | 1303 | CG14962-RA | 37..387 | 48..398 | 416 | 71.2 | Plus |
| Asciz-RB | 2002 | CG14962-RB | 1189..1342 | 501..654 | 291 | 76 | Plus |
| Asciz-RA | 1303 | CG14962-RA | 490..643 | 501..654 | 291 | 76 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:09:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3164702..3165052 | 398..48 | 416 | 71.2 | Minus |
| 3L | 28110227 | 3L | 3164446..3164599 | 654..501 | 291 | 76 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:09:46 has no hits.
MXO01331.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 22:24:36 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 19:41:38 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 19:41:38 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:24:36 has no hits.
