MXO01333.3prime Sequence
852 bp (835 high quality bases) assembled on 2007-03-15
> MXO01333.3prime
ATGGTCTAGAAAGCTTGCCTGCTCCTCGTCACCCAACTCGTGCTTGATCT
TGGAGAAGTCGAACGTCTCGCCAGTGCCCCGCTTGAATATGTTCAACACA
TCCAGGCAAGTAGTCTCAAAGTGCGTGGTCGCATCGTAAGACTCCGAAAT
AAAGATTTGAGACTCGGATCCATCATCGATCGGCTCCAAATAGTCCGAAA
TGGTTACAAACTTTTGTGCGATCGGCTCCAGCAAGTCCAAGCCAGGCTTG
ATCTCCACCTCCGGGTTCTCGGTCTCAACGGTGGTCGAGACCATGCCCAC
GAACCAACCCTTGGCGGCCACCTGATGAGTGGAGCTCACAAGCGACACAT
AGATGTCCGACTTGCGGCCGACCTGCTTTTGTGGAATGATAATCTGCGTG
GAGAGACCATCCTTGGTGCTGGCCACCGGATGGTCCAGAATGCAAATGCA
GCGAATCACCTTGCCACGCTTGCGCACCTTCTCGGGCACGTAGCTGGGAT
CGCAGTAGACCTGCTTGCACTTGGCGACCTCTTCGCCGGAGCGCACTCCC
ACCACCTTGCCGCCCTCGCCGAGGACAATCTCGTCGATGGGCTTGTCAAG
CATGTAGGTGCCGCCGTAGATGGCCGACAGACGTGCGAATCCCTGGGGCA
GCTCACCCAGGCCGTACATGGGATAAAGGTAGGGCGACTTGCCGTAACGC
GCCAGCGAATCGGAGTAGAGCTTAATCCGCCGGATGGTGTTCACGGCCGG
CTCGTTCAGATACTCATCGTCGCGGAAAAGGGCCAGGGCGTGGCCGGTGA
AGTCCTGCGTGTTCTTGTCCAGTCCGAACTTGTCGTACAGACCCTGCATG
TT
MXO01333.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:04:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4422-PA | 1332 | Gdi-RA | 496..1329 | 852..19 | 4170 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Gdi-RC | 2501 | CG4422-RC | 757..1590 | 852..19 | 4170 | 100 | Minus |
Gdi-RB | 2421 | CG4422-RB | 677..1510 | 852..19 | 4170 | 100 | Minus |
Gdi-RA | 1661 | CG4422-RA | 677..1510 | 852..19 | 4170 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9492087..9492547 | 19..479 | 2305 | 100 | Plus |
2L | 23513712 | 2L | 9492625..9493002 | 475..852 | 1890 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:07:50 has no hits.
MXO01333.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:28 Download gff for
MXO01333.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4422-PA | 496..1332 | 15..852 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:34 Download gff for
MXO01333.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gdi-RA | 677..1513 | 15..852 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:40 Download gff for
MXO01333.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gdi-RA | 677..1513 | 15..852 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:40 Download gff for
MXO01333.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9492083..9492545 | 15..477 | 99 | <- | Plus |
2L | 9492628..9493002 | 478..852 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:34 Download gff for
MXO01333.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9492083..9492545 | 15..477 | 99 | <- | Plus |
arm_2L | 9492628..9493002 | 478..852 | 100 | | Plus |
MXO01333.5prime Sequence
822 bp (694 high quality bases) assembled on 2007-03-15
> MXO01333.5prime
CAGTCGACATGAATGAGGAATACGATGCGATTGTGCTAGGAACGGGCCTC
AAGGAGTGCATCCTCAGCGGGATGCTGTCCGTGTCCGGCAAGAAGGTTTT
GCATATTGATCGAAACAAGTACTACGGCGGCGAGTCCGCCTCGATAACGC
CGCTGGAGGAGCTCTTCCAGCGCTACGGACTGGAGCCGCCCGGCGAACGA
TTTGGGCGTGGCCGCGACTGGAACGTGGACCTGATCCCCAAGTTCCTGAT
GGCCAATGGCCAGCTGGTCAAGCTGCTGATCCACACGGGCGTCACCCGCT
ATCTGGAGTTCAAGTCCATCGAGGGCAGCTACGTTTACAAGGGCGGCAAG
ATAGCCAAGGTGCCGGTGGACCAAAAGGAGGCCCTGTTTTCCCCCCTCCT
GGGTATGTTCGAGAAGCGTCGCTTCAAGAACTTCCTCATCTACGTGCAGG
ATTTCCGAGAAGATGACCCCAAGACCTGGAAGGACTTTGACCCCACCAAG
GCCAACATGCAGGGTCTGTACGACAAGTTCGGACTGGACAAGAACACGCA
GGACTTCACCGGCCACGCCCTGGCCCTTTTCCGCGACGATGAGTATCTGA
ACGAGCCGGCCGTGAACACCATCCGGCGGATTAAGCTCTACTCCGATTCG
CTGGCGCGTTACGGCAAGTCGCCCTACCTTTATCCCATGTACGGCCTGGG
TGAGCTGCCCCAGGGATTCGCACGTCTGTCGGCCATCTACGGCGGCACCT
ACATGCTTGACAAGCCCATCGACGAGATTGTCCTCGGCGAGGGCGGCAAG
GTGGTGGGAGTGCGCTCCGGCG
MXO01333.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:04:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4422-PA | 1332 | Gdi-RA | 392..814 | 400..822 | 2065 | 99.5 | Plus |
CG4422-PA | 1332 | Gdi-RA | 1..378 | 9..386 | 1890 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Gdi-RC | 2501 | CG4422-RC | 262..1075 | 9..822 | 3935 | 98.9 | Plus |
Gdi-RB | 2421 | CG4422-RB | 182..995 | 9..822 | 3935 | 98.9 | Plus |
Gdi-RA | 1661 | CG4422-RA | 182..995 | 9..822 | 3935 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9492684..9493104 | 822..402 | 2075 | 99.5 | Minus |
2L | 23513712 | 2L | 9494238..9494615 | 386..9 | 1890 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:12:11 has no hits.
MXO01333.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:28 Download gff for
MXO01333.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4422-PA | 1..814 | 9..822 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:46 Download gff for
MXO01333.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gdi-RA | 182..995 | 9..822 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:33 Download gff for
MXO01333.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gdi-RA | 182..995 | 9..822 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:52:33 Download gff for
MXO01333.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9492684..9493103 | 403..822 | 99 | <- | Minus |
2L | 9494222..9494615 | 9..402 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:46 Download gff for
MXO01333.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9492684..9493103 | 403..822 | 99 | <- | Minus |
arm_2L | 9494222..9494615 | 9..402 | 98 | | Minus |