MXO01344.3prime Sequence
825 bp (729 high quality bases) assembled on 2007-03-15
> MXO01344.3prime
ATGGTCTAGAAAGCTTGCGGCCTCCACATTCTCGTCCTGCTCCTCCAGTT
GGACACCCACTTCATGCTCGGCCCGCCTCCGCTGTCTGCCCGCCTTGTGC
GACTGGCGATGGATGGCGAGTGAGATGCGGCGCTTGAAGGACTTGCCGCA
CTGCTCACAGCCGAACGGTCGCTCGCTGCTGTGGACGAGCATGTGGCGGT
TGAGCTCGGATGTGCTGCCGAAGCTGCGCTTCTGGCACACCGGGCACGGG
TGGGGCTTCTCCTGGCTGTGGCAGCGCTTGTGGGCAATCAGATTGCTCGA
GTAGCGGAAGCGACGGCCGCAAATGTCGCAGCCGTGCGGCTTCTCGCCCG
TGTGGGTGAGCATGTGCTTCTTGTAGCCCGATTTCTCCCCCCCCCTCTTG
CCGCAGATGCTGCACTCAAATGGCTTGATTCCGCTGTGGATTAGAAGGTG
TGTGCGCAGCGAGGACGCCTGCCGGTAGACCTTGAAGCAGGTGGGGCACC
TGTTCGGATTGTTACGATCGTGCAGCGTGACATGGCCGTCGCGGGCGTTT
CGCGTCTTAAAGGACTCTCCGCAGATTGTGCAAACGTAGGGCGTGGCCGT
GCCATGTAGCTGCATATGGTACTTGAAGGAGTTGTTGGTGCTTAGTTGCT
TGCCACAGATTTTACACTGTAGGGAGGGATTGAGGGGTTTCCAAGGCCGG
CTTCCACTGGGCAAAGTTTTCTGCGTCGCCGAAGTCTGTGCTGATTTCTC
CACAATCTCGTAGACATCTTCGCCAGCTTTGGCCTGGCAAACGGGCTCCA
CTTGGAGGCACTCTTCAATGCAGTG
MXO01344.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:05:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2712-PA | 1506 | CG2712-RA | 697..1128 | 825..394 | 2085 | 99.3 | Minus |
CG2712-PA | 1506 | CG2712-RA | 1141..1500 | 381..22 | 1800 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2712-RA | 1804 | CG2712-RA | 793..1606 | 825..12 | 3860 | 98.3 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2733556..2734204 | 660..12 | 3065 | 98.2 | Minus |
X | 23542271 | X | 2733321..2733485 | 825..661 | 795 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:05:42 has no hits.
MXO01344.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:35 Download gff for
MXO01344.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2712-PA | 697..1506 | 16..825 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:54:09 Download gff for
MXO01344.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2712-RA | 793..1606 | 12..825 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:41:19 Download gff for
MXO01344.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2712-RA | 793..1606 | 12..825 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:41:19 Download gff for
MXO01344.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2733321..2733485 | 661..825 | 98 | -> | Minus |
X | 2733556..2734204 | 12..660 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:54:09 Download gff for
MXO01344.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2627354..2627518 | 661..825 | 98 | -> | Minus |
arm_X | 2627589..2628237 | 12..660 | 98 | | Minus |
MXO01344.5prime Sequence
815 bp (279 high quality bases) assembled on 2007-03-15
> MXO01344.5prime
CAATCGACATGACGACCATGTCGCCCCCGTCCCCCATGGACGCCTTGTGC
CGCGTGTGCCACACAGCATCGCCGCGCTGCCTGCCGCTCTTCAAACCGCT
CGACGATCCAATTTCCGGCAAACCAGCGACGCTGGCCAGCATTTTAAGCT
ACTGCAGCGGTCTGGAGATCCTAGAGGCGGAGCTCTTCCTGCCCCACCAC
ATCTGCCCGGACTGCGTGGCCAAGTTGCGGCTCTCGCTGGAATTCAAGCG
GAGTGTCCATCGCATGGACAGAATTCTGCGGAAAAGTCATGCGGACTTTT
GCCGCAACAAAAAGATCAGCGCGGTGAATACTATGGCCAGGCTGTCAACC
GAGATTCCGGAGGATTTTGTACTCGTGCTCGATGATTTCCCCCCCCCCGA
CTATCCAGCAGAAACGATACAAAAAAAGGAGCAACTCCTGGTCGTATAAT
CAGATGAGGCGGAGAGCCGGCTGGAAGCGCCAATTGTACAGGAGGAGAGG
CTGGATATTGCACTGGAACAGCACGAAGACAATCTCTGCGAGATTGTCAA
CGATCCGGATCCGGAGCAACGTAGGAGCAGGTTAGAAAGATCCGAGCCAG
CGCTGCAATGTCCCATTTGCGGCAAACAACTGGCTAGGAAGCGGACCTTT
CAGTACCACATGAGGCTACATGGCCAGCCAAAAATTCGCCAAGAAGACAA
CGACCACTGCATTGAAGAGTGCCTCCAAGTGGAGCCCGTTTTGCAGGCCA
AAGCTGGCGAAGATGTCTACGAGATTGTGGAGAAATCAACACAGACTTCG
GCGACGCAGACAACT
MXO01344.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:05:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2712-PA | 1506 | CG2712-RA | 419..802 | 427..810 | 1820 | 98.9 | Plus |
CG2712-PA | 1506 | CG2712-RA | 1..377 | 9..385 | 1760 | 98.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2712-RA | 1804 | CG2712-RA | 96..903 | 8..815 | 3635 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2732564..2733170 | 8..614 | 2660 | 95.9 | Plus |
X | 23542271 | X | 2733231..2733431 | 615..815 | 975 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:12:16 has no hits.
MXO01344.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:35 Download gff for
MXO01344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2712-PA | 1..807 | 9..815 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:47 Download gff for
MXO01344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2712-RA | 91..903 | 1..815 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:44 Download gff for
MXO01344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2712-RA | 91..903 | 1..815 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:44 Download gff for
MXO01344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2733231..2733431 | 615..815 | 99 | | Plus |
X | 2732559..2733170 | 1..614 | 95 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:47 Download gff for
MXO01344.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 2626592..2627203 | 1..614 | 95 | -> | Plus |
arm_X | 2627264..2627464 | 615..815 | 99 | | Plus |