Clone Sequence Records
MXO01348.3prime Sequence
783 bp (751 high quality bases) assembled on 2007-03-15
> MXO01348.3prime
ATGGTCTAGAAAGCTTGCCGTGGCGTCCATCAAAAAGCGCTGGAAGACTT
CGCCATCGGAACTAGGTAGCTCTGTTTGTTGCGGTGAGTAGATTCTCAAG
TTCTGGAGTTGCTGCAGCGGAGAGCCATTCCCGCTGAAGTGTACCACCGC
AACCGGCTGTAGGGATATGAGCTGTCCCTCCTCCCGCGGCTCCACACCAC
AGATGCCCAGCTTTTGGCACTGCTCAACGACAATGTCGTCGATTGACTGC
GAAAGCAGTGCCTCCTGCTCAGGATCCACAATGGAGCTGCTGTTGATGGC
AGCTATTTCGGCGCTCGCTGGTGAAGGCTGAGTATGCGAGTCGTTGCCCT
CCAGGAACGCCTTTATCAGCTGCTCCGGTGTCTGGGCCTCCTCGGTGGGA
CATCGATGGGTCCTTTGACTGACCTTGTACCTGAACGTCTTTTGGCAGAG
CTCGCACTTGTAGGGCATCACTCCCGTGTGGATGCGCGTGTGGACAAGGA
AAGAGACTCGCTGCCGGAAACACTTGCCGCAGACTTCGCACTTGAAGGGC
TTTTCGCCGCTGTGAATCCTCTGGTGGTTATGCAGCGTAGACAGTTCCTT
GAAGGCGCGTCCACAAACCCCGCAGACATGGGGCTTTACCTCGCTGTGGT
AGAGCAAATGCTTGTGGTACGACTGCTGGAAGGTGAAGGTCCTGGCGCAG
ATCTCGCATGTGTACGGCATCTCGCCGGTGTGGAGCCGCTTGTGCTTCTT
CAGAAAGTACTTGGTGGTGAAGGACTTGCTGCA
MXO01348.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:05:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14655-PA | 1578 | CG14655-RA | 811..1575 | 783..19 | 3825 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14655-RA | 2137 | CG14655-RA | 1039..1803 | 783..19 | 3825 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 4777831..4778340 | 19..528 | 2550 | 100 | Plus |
3R | 32079331 | 3R | 4778509..4778765 | 527..783 | 1285 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:05:54 has no hits.
MXO01348.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:38 Download gff for
MXO01348.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14655-PA | 812..1578 | 18..782 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:54:18 Download gff for
MXO01348.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14655-RA | 1040..1808 | 11..782 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:41:27 Download gff for
MXO01348.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14655-RA | 1040..1808 | 11..782 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:41:27 Download gff for
MXO01348.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4777826..4778339 | 11..527 | 99 | <- | Plus |
3R | 4778510..4778764 | 528..782 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:54:18 Download gff for
MXO01348.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 603548..604061 | 11..527 | 99 | <- | Plus |
arm_3R | 604232..604486 | 528..782 | 100 | | Plus |
MXO01348.5prime Sequence
833 bp (735 high quality bases) assembled on 2007-03-15
> MXO01348.5prime
CAGTCGACATGTGTTCCACCTCGGTGCTGTGTCCGCTCTGCGCGGTGCCC
AGTTTCGGCAGTATTGACGCACTGCAGCAGAGGCTGATCAAGGCGGCCAA
CGGCCCACTGGCCTGTCCCTTTGCCAACTGCAAGGAGCTCTTCCTGGGGC
TGGACAAGCTCACCATCCACCTGTTCTCGCACACAAGTCTGATGGCTCAG
GAGGGAAACGAGAGTCCAGCGAATGGCCAACCCGCCTCGTCCCGGGGCTT
CCTTGCCGCAGCTCCTCCCAAACGGAGGGCCAAGCGAACCAGGTCCAAGC
CCGTCGTCCCAACCCCACCGCCTGTGCGGACCACCCCGCCCGCCCACTGC
GACATTTGCGAGTTCAGTTTCCGGAATACCGAGTTGATGCACCCGCCCGT
CCGCTTAGTCCACGAAAATGCGGAGGGAGAACCCAAGCAAAAGGAACCCC
AACAGAAGGAACCGGACCAGGAGCCCTACAAGTGCCATCTCTGCTCCAAG
ACGTTCCGAATGAAGGGCTCCCTTCGAATCCACCTGAAAGTAGTGCACAT
GATGGGCGTGCCCTGCTCCAATCCCAATCCAAATCCTAATCCCAGTCCTA
CACCCGCTTCTACCACCAGTGCAGTTACTGCCACGCCCAAGCTGAGCATT
TGCGATCGCATTCGACACACAGAGCCTGGAGCCCTTGGCAACGGAAATAA
CTCCACGTGCACCGCATCCCAGCCATACGCGCTGAGTGGGGCGCTGAGCA
TGCTCCAGCAGTCCCCCAGTTCGCCGGAGTCGGGCACGGCCACCCCGAAG
CTGTGGGAGTGCGATGTGTGCAGCAAGTCCTTC
MXO01348.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:05:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14655-PA | 1578 | CG14655-RA | 390..825 | 398..833 | 2180 | 100 | Plus |
CG14655-PA | 1578 | CG14655-RA | 1..375 | 9..383 | 1875 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:53:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14655-RA | 2137 | CG14655-RA | 225..1053 | 5..833 | 4040 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:53:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 4779618..4780078 | 465..5 | 2200 | 98.5 | Minus |
3R | 32079331 | 3R | 4778751..4779120 | 833..464 | 1850 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:53:46 has no hits.
MXO01348.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:39 Download gff for
MXO01348.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14655-PA | 1..825 | 9..833 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:44:56 Download gff for
MXO01348.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14655-RA | 221..1053 | 1..833 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:09 Download gff for
MXO01348.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14655-RA | 221..1053 | 1..833 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:09 Download gff for
MXO01348.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4778751..4779119 | 465..833 | 100 | <- | Minus |
3R | 4779619..4780082 | 1..464 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:44:56 Download gff for
MXO01348.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 604473..604841 | 465..833 | 100 | <- | Minus |
arm_3R | 605341..605804 | 1..464 | 98 | | Minus |