MXO01358.3prime Sequence
878 bp (767 high quality bases) assembled on 2007-03-15
> MXO01358.3prime
ATGGTCTAGAAAGCTTGCCAGCACCATCACCACTTTGGAGGTGGACACCG
GCTGCTCATGAACTTCGGTTATGTGAAGGTTGGTTGCCGATCCACCGGTC
GCACCTCCACCGGTCGGACTTCCACCTGTCGCACCTCCGCCTGTCGCACC
TTCTGCGCCCGCTTGTCGGCTGGGAGGATTGATGGACTGAACAGCAACGG
TGGCCGTCACCGGCGACTCCTTGTTGTGGACGCGCATATGACTGGCCAGT
CGCTTCTTTGTGGGAAAGGCCTTAACGCAGACCTCGCACTTAAACGGCTT
TTCGCCGGAATGGAGGCGAACATGGGCATTGAGGTTGCTGGTAAAGGTGA
AGGCATGCCCGCAAACATCACACTTGTGCGCCTTGACGCCACTGTGGACC
ATCATGTGCTTCTTGTAGCCCGACTTCTGAGACAGTCCCACGCCGCAGAT
CTCGCAGGTGAAAGCCTTCTTGCCGGTGTGGCTTATCTTGTGCTGGCGCA
GCGAGGACGAATCGTAGTAGGCCTTGTCGCACAGATCGCAGGCGTATGGT
CGCTCGCCCGTGTGCGTGAGCTTGTGGCGCCGCAGATGATCGAACGCCGC
ATATCCGCGGCCGCACTGATCGCAGTTGTAGGGTTTCTTCTCCGCATGAG
TTCTCTTGTGCACTGCCAGACTGGAGGTGGTACGATAGAAGCGGCCGCAT
ATGCTGCACTGGTGCGGCTTGACATTTGTGTGTGTCAGCATGTGTTCCTT
GTAGTTGCGTAGGTGCTTCAGACGCTTGCCACACTCCTCGCACTCGTATT
GCTTCTCGTCCACGTGGGAGCGCATGTGCTGGTTGAGACGGCACTGCTGG
CGGAACGCCTTCTGGCCCACGGTGCACA
MXO01358.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:06:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2711-PA | 1779 | dwg-RA | 917..1776 | 878..19 | 4275 | 99.8 | Minus |
| CG2712-PA | 1506 | CG2712-RA | 1135..1161 | 429..403 | 135 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:08:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dwg-RA | 2002 | CG2711-RA | 1051..1910 | 878..19 | 4285 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:08:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2729091..2729950 | 878..19 | 4285 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:08:20 has no hits.
MXO01358.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:47 Download gff for
MXO01358.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2711-PA | 918..1779 | 16..877 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:52:32 Download gff for
MXO01358.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dwg-RA | 1052..1915 | 13..877 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:50:45 Download gff for
MXO01358.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dwg-RA | 1052..1915 | 13..877 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:50:45 Download gff for
MXO01358.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2729092..2729955 | 13..877 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:32 Download gff for
MXO01358.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2623125..2623988 | 13..877 | 99 | | Minus |
MXO01358.5prime Sequence
802 bp (677 high quality bases) assembled on 2007-03-15
> MXO01358.5prime
CAGTCGACATGATGAATAGCAAGATCGCCGAGGTAGTGGTGCTCAACTGC
CGGACGTGCACGCGTGCCTGCAAGCTGCACAAGCCGCTGCAGGAGGAGAT
CGATCTGGGTTCGGAGGGCAGCACCACGCTGGCCAGCATGCTAAACTACT
GCACGGGACTCTCGTTCGAGCCGCAAGACGGCGCCGCCATGCCGCAGCAC
ATCTGCCTCCACTGCCTGCAGCTGCTGGAACAGGCGTTCAACTTCAAGCG
CATGGTCATCGATTCGGACGAGCTGCTCCGCCTGGGCCTGGACGAGGCGC
GCTGCTCCAGCTTTCACGAGAGTCAGACTCATAGCCCCAACCAGAGCCAG
CAGCACGACCAGCAACAGCAGGCGTTCGACTCCACCGATGACTACCCCAC
GATCGAGATGCTCAACGAGGAGCAGGAGAACGTCGCCAATTTGGATGAAG
AACTAGCAGAGGAGGATCGTCGCATCTTCGCGATGACCGTGGATGAGGAG
GAGGAGTTTCTCACCGAGGAGGTGGATCAGGATGACGAGCTGTCGGAGGA
GGAGCACCAGCTGGCACAGTCGGGCGACCAGCAGGAGGAACACATCACTA
TGGAGAGCGTGCATGAGTTTCAGCCCGCCGAAGTGGAGTATGTGACCATT
AATAATGAGTTCGAAACGATCGTCACGGAGGAGGATGAGTTCGAGGTGAT
GAACGACTCCGGCGCCCACGACGCCATACTGGACTGTCAGATGATTGTGA
TACCCGCCGAGGGAGCCATTGACGAGGTCATCGGCGAGGAGACCCTCAAA
TT
MXO01358.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:06:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2711-PA | 1779 | dwg-RA | 393..789 | 401..797 | 1960 | 99.7 | Plus |
| CG2711-PA | 1779 | dwg-RA | 1..380 | 9..388 | 1900 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dwg-RA | 2002 | CG2711-RA | 134..928 | 8..802 | 3870 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2727831..2728263 | 8..440 | 2090 | 98.8 | Plus |
| X | 23542271 | X | 2728545..2728906 | 441..802 | 1780 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:44:44 has no hits.
MXO01358.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:47 Download gff for
MXO01358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2711-PA | 1..794 | 9..802 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:44 Download gff for
MXO01358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dwg-RA | 131..928 | 1..802 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:48 Download gff for
MXO01358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dwg-RA | 131..928 | 1..802 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:48 Download gff for
MXO01358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2727828..2728263 | 1..440 | 97 | -> | Plus |
| X | 2728545..2728906 | 441..802 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:44 Download gff for
MXO01358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2621861..2622296 | 1..440 | 97 | -> | Plus |
| arm_X | 2622578..2622939 | 441..802 | 99 | | Plus |
