Clone Sequence Records
MXO01365.3prime Sequence
740 bp (738 high quality bases) assembled on 2007-03-15
> MXO01365.3prime
ATGGTCTAGAAAGCTTGCGGCTGTTAGGGACGTGCCATCCAGCAGCACCG
ACGCCACCTCCTCGTTCTGTTCTACGTACACTAGACGAGGATCCTCGCCA
AACTCCAGTCGCCCGTATCTGGCCACCAGCGGTGTCTTGTTGTTGCTCAC
TTGCGGTGCGCGCGGCCACTTCCTTTTGGGCTTCGTGTGCGTCAGCATGT
GGGACTTGAGGTTCGTTGACTGGGCGAAGCACTTGGAGCAGCCATCAATG
GGACAGTGGTAGGGCCTATCGCCAGTGTGTATCCGTACGTGGGTGCGCAG
ATTGAAGTCCAGCGAGAAGCGCTTGCCGCACCCCTCAAAGGTGCACTCAA
AGGGCTTCTCGCCGGTGTGCACCAGCTGTTTTTTCTCCCCCCTGGAGCTC
TCTACAAAGCTCTTGAAAAAAAGGGTGCACACATGACCGCGCGGTCCGTG
CGTGTGCATGTGCTTGCGCATGGCCGAGTGGTTGCGAAACTCCTTGTTGC
AGCCGCGATGGGTGCAGCGAAACTTTGGCTCCTCATCCTCTTCGCCGGCC
GCGCCAGCTGCTCCCATGGCATTACCAGCCGTCTGATTGGCCACTGCAGT
CGGTAATTTGGTTACAATTGTGGGTCGTTGGGGTCGGGCTGGATTGCTGG
AAGCCACTAGTGGCGGTGGGGGATTTGGTGTCGCCACCTGAGCCGCCGCC
GTGAGTTGCCTCTTTGTCACCTTTGACTGATTTCCCGCAC
MXO01365.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:06:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3445-PA | 2010 | phol-RA | 1648..2004 | 378..22 | 1785 | 100 | Minus |
| CG3445-PA | 2010 | phol-RA | 1286..1600 | 740..426 | 1575 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| phol-RB | 3384 | CG3445-RB | 1933..2651 | 740..22 | 3340 | 97.6 | Minus |
| phol-RA | 3139 | CG3445-RA | 1933..2651 | 740..22 | 3340 | 97.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9453536..9454254 | 22..740 | 3340 | 97.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:13:20 has no hits.
MXO01365.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:52 Download gff for
MXO01365.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3445-PA | 1286..2010 | 15..740 | 97 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:56 Download gff for
MXO01365.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| phol-RA | 1933..2659 | 12..740 | 97 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:47 Download gff for
MXO01365.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| phol-RA | 1933..2659 | 12..740 | 97 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:47 Download gff for
MXO01365.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9453534..9454254 | 20..740 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:56 Download gff for
MXO01365.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9446634..9447354 | 20..740 | 97 | | Plus |
MXO01365.5prime Sequence
796 bp (791 high quality bases) assembled on 2007-03-15
> MXO01365.5prime
CAGTCGACATGACAAGTCATCATCATCACGTCGGCGTCGGAGGGAACTTC
CAGCCTCAACTGCATCAGATACGAGCGCCCATCGTGAAGAATCTATCGCT
GGCCGCTGCGGCGGTACCGTTGCCCCTGCACTCCGCCCCGTCGTCGGCAT
ACTTCACTCATGCACACCAGCCTACGGCGGCTACCATAGTCGAGCAAGAT
CCGTACACCGTTTTGGCGGGCGATCCGATGGGCGAGGAAAGCGAGAGCTT
CCTGATCGAGGAGATCATCGACGACTATGATGATGAGGCTAATATCGTCG
TAGACTCAGGCGAATTCTTTGAGCACTATGAATACTATCCGGTGGATCGG
CTGGACAGACTTACCTCGGTCACGGTGGCTACTTTTCACCCCCCCCCCCC
GCCGATCATCATGCAGCAAACAAAAGAGGATGAGGAATTCATCGAGGAGG
ATGGACAGCAGATGACATCCTCCTGCGATGGCGATGGCGATGAGGATGAT
GAGGCTACCGCGCCGGCTACGACAAATGCCTTCGAGATTGCCTCCGAGAT
GCTAACCACCATCGAGGCCACAAACATCAAGGAGGAGCAGCTCGAGAGCG
ACTTCTATATGAAGGCGACCGAGGATTCAAACAGTTCGAATGGCCAGCTG
CAGGATTTTAAGCTATTTGGAAGCAGTCGCGTCGAGAGGCCCATGGGAAA
TTCAGCGGCCAAGCGCTGGAAGCAAACAAAGGTACCCATACGCATAACGC
AGGATGAGTTCAATGTCACCCTTTGGTCCTCGCTCAACTCGGAGGA
MXO01365.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:06:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3445-PA | 2010 | phol-RA | 1..374 | 9..382 | 1870 | 100 | Plus |
| CG3445-PA | 2010 | phol-RA | 421..788 | 429..796 | 1840 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:08:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| phol-RB | 3384 | CG3445-RB | 648..1435 | 9..796 | 3700 | 98 | Plus |
| phol-RA | 3139 | CG3445-RA | 648..1435 | 9..796 | 3700 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:08:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9454752..9455539 | 796..9 | 3700 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:08:28 has no hits.
MXO01365.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:53 Download gff for
MXO01365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3445-PA | 1..787 | 9..795 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:47 Download gff for
MXO01365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| phol-RA | 640..1434 | 1..795 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:58 Download gff for
MXO01365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| phol-RA | 640..1434 | 1..795 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:58 Download gff for
MXO01365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9454753..9455547 | 1..795 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:47 Download gff for
MXO01365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9447853..9448647 | 1..795 | 97 | | Minus |
