MXO01369.3prime Sequence
894 bp (799 high quality bases) assembled on 2007-03-15
> MXO01369.3prime
ATGGTCTAGAAAGCTTGCACTCTTGAATAGACCCACGCACATCAGGAGAT
TTCGGCGCGTAAAGTGCAGGCTGACAAATGGCGAGTTCTTGCTGGGGAAA
GTACGCATGAGGTAGACGTCCTCGTCGTTCTCATCCTGATGGTGCGACAC
AGTGATGTGATTGCTGATATAGTCTTCGGTAACCTTGTGAAAGTCCCACA
GAGTTAGATTGTTATCCAAGCCGGCTGCAGCCAGGACTGTTCCATCGCGA
CTAAAGGTGATCGTGGTCACAGTGCTAGTGTGCCTCAACAGGGTGGTGAC
CAGGGATCCGTTCGACAGATCCCAGATGATGATATTGTGATCTACTGAAC
CCGAGGCCAGATACCGGCCGCAGGCGGAGAATGCCACACAACTCACCGAT
CCCTTGTGGCCCGTCATCAGGCGTACCGACTGACCGGTCATGTTGTCCCA
CAGGCGTACCGTGCGATCGCTAGAACCGGTGGCCACATAATTGGAATTGG
GATGAAATTGTACACAATCCACGTCCGACAAGTGACCCACGAATACGCGC
AACGCTTGATTGGAATCCGTGGCCCACAGACGAGCAGTTTTGTCGTACGA
ACAAGAAACAAAATAGTAGCCATGCGGCGCAAAGCGAACATCCCACACCG
GGTAAACGTGCCCGCGGTAGGTGACTACGCAGGACCAGGTGAGCAGAGAC
CACAGCCTTATGGTGCTGTCCTCGGAACATGAGAGCAACAGGTTCATCTC
GGGGGCAAAGGCACAGCGGTATACGGGTCCGGTGTGACCCATTAAGCTCC
TGGTTACCTCACCACTTCGGTCATCCAGCATACGCACATTGATATCCGCC
GATTCCTTGTCCAGTTCGCGAAGGAAATCTGCATCCTTCAGCGT
MXO01369.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:06:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7704-PA | 2115 | Taf5-RA | 1237..2112 | 894..19 | 4280 | 99.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:23:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taf5-RA | 2362 | CG7704-RA | 1305..2180 | 894..19 | 4320 | 99.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:23:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10877494..10878369 | 19..894 | 4320 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:23:57 has no hits.
MXO01369.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:55 Download gff for
MXO01369.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7704-PA | 1237..2115 | 18..894 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:31:09 Download gff for
MXO01369.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf5-RA | 1305..2180 | 19..894 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:21:27 Download gff for
MXO01369.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf5-RA | 1305..2180 | 19..894 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:21:27 Download gff for
MXO01369.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10877494..10878369 | 19..894 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:31:09 Download gff for
MXO01369.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6764999..6765874 | 19..894 | 99 | | Plus |
MXO01369.5prime Sequence
866 bp (676 high quality bases) assembled on 2007-03-15
> MXO01369.5prime
CAGTCGACATGAGCCTGGAAGTGAGCAATATAAACGGGGGAAACGGTACT
CAATTGTCCCACGACAAGCGTGAGCTGCTGTGCCTGCTGAAACTCATCAA
AAAGTACCAGCTGAAGAGCACTGAGGAGCTGCTCTGCCAAGAGGCGAATG
TGAGCAGTGTGGAATTGTCGGAAATCAGCGAAAGTGATGTTCAGCAGGTG
CTGGGCGCAGTTTTGGGAGCTGGCGATGCCAACCGGGAGCGGAAACATGT
CCAATCTCCGGCGCAGGGTCATAAACAGTCCGCGGTGACGGAGGCCAATG
CTGCAGAGGAACTGGCCAAGTTCATCGACGACGACAGCTTTGATGCTCAG
CACTATGAGCAGGCATACAAGGAGCTGCGCACTTTCTTTGACGACTCCCT
GGACATATACAAGCATGAGCTGTCCATGGTTCTGTACCCAATTCTGGTGC
AGATCTACTTCAAGATCCTCGCCAGTGGACTAAGGGAGAAGGCCAAAGAA
TTCATTGAGAAGTACAAATGCGATCTCGACGGCTACTACATAGAGGGTCT
TTTCAACCTTCTTTTGCTGTCTAAGCCCGAGGAGCTGCTGGAGAATGACC
TCGTAGTAGCCATGGAGCAGGATAAGTTTGTCATTCGCATGTCCAGGGAC
TCGCACTCTCTGTTCAAGCGACACATTCAGGATCGCCGGCAGGAAGTGGT
GGCAGATATTGTTTCCAAGTACTTGCATTTCGACACATACGAGGGCATGG
CGCGCAACAAGCTGCAGTGCGTCGCCACCGCGGGCTCGCACCTCGGAGAA
GCCAAGCGACAGGACAACAAAATGCGGGTGTACTACGGACTGCTCAAGGA
GGTGGACTTTCAGACT
MXO01369.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:06:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7704-PA | 2115 | Taf5-RA | 1..858 | 9..866 | 4215 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Taf5-RA | 2362 | CG7704-RA | 69..926 | 9..866 | 4245 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10878748..10879605 | 866..9 | 4245 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:08:51 has no hits.
MXO01369.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:56 Download gff for
MXO01369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7704-PA | 1..858 | 9..866 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:27:53 Download gff for
MXO01369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf5-RA | 61..926 | 1..866 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:29 Download gff for
MXO01369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Taf5-RA | 61..926 | 1..866 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:29 Download gff for
MXO01369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10878748..10879612 | 1..866 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:27:53 Download gff for
MXO01369.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6766253..6767117 | 1..866 | 99 | | Minus |
