MXO01370.3prime Sequence
863 bp (792 high quality bases) assembled on 2007-03-15
> MXO01370.3prime
ATGGTCTAGAAAGCTTGCTCCACTAACCGAGCGCGATTCGTTCAACTCCA
TTTGGTAACTGGCCAGAGTGTCCTGACGTTGCTTCAGCTGCAGCGACAAA
AGCTGGCGCTGCATACTAAGCTCCTTCTCCTCCTGGGTCAGCTGGATGCA
TAGCTTGGCCGCCTCTCGCAGGATATTTACCTTGGGAGCCCGCTCCTTGT
CCCTAATTGTGGGAATCTGTTTCTTTAGAGCCTCAAAGAGGTTCTTGAGT
CCAATGCGTCGCTGACGCTCCATATCATTGTGCTGATTGCGCTTCTCGAT
CGTATCGGCCTCATCAAAGCCCAAAACAAAGTCCTTCCGATGGACACTGC
TGTTGGAGCTTGTGCTAGTGGCAATTCCACCACTGCGCCGCTGCCAATTA
CGATCCATGGCATCCACATCCTGGCCAGACGATATCGGAGATGTATTGCC
AGACGAGGTGCCAACCACCTTCTTGCCACGACTCTTTTTGCTCATCATGG
AGCTATGCGTCACTTTGTTATTGACTCCCGGCAGATAAACGCTGCTGGAG
GAGATCAACAAGCCTGGATCCTTCAGACTGGATCGTTTGCGTCCCTTGTT
CGAACTGGAGGTGGTGAAGCTTGACTGCGAACTGGAACTGGAGCTGCTCG
AGCTGACATTTGAAGAGTCCACGGATAGCGGCGAGTAGGACGGCGAAGCG
GAGGAGCAGTTCTGATACGGTGTGCTCGACGGTGATGGATAACGCGAGTT
GGCCACCGATTTCACTGGACTGCTGCTGGCCGGTGTGTACGGCAGATTGA
AGTTATTGTAGCGCGGTTTTTGCTTCATGTGATCCATCGAGATCTTATGG
GCCATCTGGAACT
MXO01370.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:06:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10798-PA | 2154 | dm-RA | 1307..2151 | 863..19 | 4200 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dm-RA | 3484 | CG10798-RA | 1938..2782 | 863..19 | 4210 | 99.9 | Minus |
| dm-RB | 9166 | CG10798-RB | 1934..2778 | 863..19 | 4210 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3384465..3385309 | 863..19 | 4210 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:12:23 has no hits.
MXO01370.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:56 Download gff for
MXO01370.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10798-PA | 1307..2154 | 18..863 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:49 Download gff for
MXO01370.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dm-RB | 1934..2778 | 19..863 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:54:49 Download gff for
MXO01370.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dm-RB | 1934..2778 | 19..863 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:54:49 Download gff for
MXO01370.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3384465..3385309 | 19..863 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:49 Download gff for
MXO01370.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3278498..3279342 | 19..863 | 99 | | Minus |
MXO01370.5prime Sequence
875 bp (690 high quality bases) assembled on 2007-03-15
> MXO01370.5prime
CAGTCGACATGGCCCTTTACCGCTCTGATCCGTATTCCATAATGGACGAC
CAACTTTTTTCAAATATTTCAATATTCGATATGGATAATGATCTGTACGA
TATGGACAAACTCCTTTCGTCGTCCACCATTCAGAGTGATCTCGAGAAGA
TCGAGGACATGGAAAGTGTATTTCAAGACTATGACTTAGAGGAGGATATG
AAGCCAGAGATCCGCAACATCGACTGCATGTGGCCGGCGATGTCCAGCTG
TTTGACCAGCGGTAACGGTAATGGAATAGAGAGCGGAAACAGTGCAGCCT
CGTCGTACAGCGAAACCGGTGCCGTATCCCTGGCGATGGTTTCCGGCTCT
ACGAATCTCTACAGCGCGTATCAACGATCGCAGACTACACACCCCCCCCA
GTCAAATCAACAGCATGTCGTCAACAGTGCCGAGAACATGCCGGTGATCA
TCAAGAAGGAGCTCGCAGATCTGGACTACACGGTCTGTCAGAAGCGCCTC
CGTTTGAGCGGCGGTGACAAGAAGTCACAGATCCAGGACGAGGTCCATTT
AATACCGCCCGGCGGAAGTTTGCTCCGCAAGCGGAACAACCAGGACATTA
TCCGCAAATCGGGCGAATTGAGCGGCAGCGATAGCATAAAATACCAGAGA
CCAGACACACCTCACAGTCTTACCGACGAGGTGGCCGCCTCAGAGTTTAG
ACATAACGTCGACTTGCGTGCCTGCGTGATGGGCAGCAATAATATCTCGC
TGACCGGCAATGATAGCGATGTCAACTACATTAAGCAAATCAGCAGGGAG
CTTCAGAATACCGGCAAGGATCCGTTGCCGGTGCGTTACATCCCGCCGAT
CAACGATGTCCTCGATGTGCTCAAC
MXO01370.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:06:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10798-PA | 2154 | dm-RA | 389..867 | 397..875 | 2395 | 100 | Plus |
| CG10798-PA | 2154 | dm-RA | 1..377 | 9..385 | 1885 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:40:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dm-RA | 3484 | CG10798-RA | 632..1498 | 9..875 | 4245 | 99.3 | Plus |
| dm-RB | 9166 | CG10798-RB | 628..1494 | 9..875 | 4245 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:40:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3375006..3375872 | 9..875 | 4245 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:40:23 has no hits.
MXO01370.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:15:56 Download gff for
MXO01370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10798-PA | 1..867 | 9..875 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:34 Download gff for
MXO01370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dm-RB | 620..1494 | 1..875 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:28 Download gff for
MXO01370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dm-RB | 620..1494 | 1..875 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:28 Download gff for
MXO01370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3374998..3375872 | 1..875 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:34 Download gff for
MXO01370.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3269031..3269905 | 1..875 | 98 | | Plus |
