MXO01390.3prime Sequence
802 bp (735 high quality bases) assembled on 2007-03-15
> MXO01390.3prime
ATGGTCTAGAAAGCTTGCAACTGGCGTGCAGTCGTCTCTCTGAACGTGGG
CATCATAGTTCTGCTCGTTGATGAAAGTATGCGTGCACTTGGAGCAGTGG
AAGCGGCGATGGCGGTTGGTTCCGGGACTCTCGTGCTCCCGCAGATGGGC
CTTCATGTTGTACATCTGGGAGAAGCGCTTGTTGCACACCGGGCAGGCGA
AGGGCTTGTCCCCCGTGTGGGATCGCATGTGCCGCTCCAAGTGAGCCTTG
GTCCGGGTCTTGAAGCCGCACACCTGGCACTCCAGCCGTTTGGTCTCGCT
GTCGTGGATCATCTTGTGCTTGTACAGGGCCACCTTGTGAACGAATCGCT
TGGAGCAGACATCGCACTGGTATGGCGTTTCTCCCCACCGCCAGGCCATG
TGGTGCTTCAGCCGGAACTTGCGGCTAAAGCGTTCCGGGCACACTGGGCA
GGCGAACTGCTTCACGGGCTCGTGGTTCTGCAGGTGCCCTATGAACCCGG
AGTACGATTGCAGCGTCTTGCCGCACTGATCACAGACGTAGCCGGGAAAG
TGCTCGCGTTTCGTGTGGACATTGTAAGCGCGCCGGCTGCTGAACTTCTC
CGGGCAGCTGGGGCATTGTATGTTGACCGTGTATTCGCCGGAGCTTTCGT
TGTCCTGCTCCTGGTCCTCGCCATCGGATATTATGTACTCTATTGCGCCG
TCCAGATGTTCGTCAAAGTCACTCATGGTATCTTCCTTAAAAAAGTCTTC
CTCCTGGGCCTCTTGCTTGTCATGTGGCAACAGATCCTCCTCCTCTATCT
CG
MXO01390.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:07:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7928-PA | 1374 | CG7928-RA | 588..1000 | 802..390 | 2065 | 100 | Minus |
CG7928-PA | 1374 | CG7928-RA | 1009..1371 | 381..19 | 1815 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:03:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7928-RA | 1631 | CG7928-RA | 657..1440 | 802..19 | 3845 | 99.4 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:03:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30035431..30036214 | 19..802 | 3845 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:03:14 has no hits.
MXO01390.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:12 Download gff for
MXO01390.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7928-PA | 588..1374 | 18..802 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:59 Download gff for
MXO01390.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7928-RA | 657..1444 | 13..802 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:25 Download gff for
MXO01390.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7928-RA | 657..1444 | 13..802 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:25 Download gff for
MXO01390.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30035427..30036214 | 13..802 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:59 Download gff for
MXO01390.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25861149..25861936 | 13..802 | 98 | | Plus |
MXO01390.5prime Sequence
878 bp (797 high quality bases) assembled on 2007-03-15
> MXO01390.5prime
CAGTCGACATGAATTGCTGCATTTGTCAATTCTCGGTACGCGTACCGAAG
GACATTCACACCGATACCGTCGGACATCCGCCGGTGCTGATCAGCGAACT
GGTACTGCAGTGCACCCGGGGCACGAATTACGTCCTCACGGAGGAATCGT
CGACGATCTGCAAGAAGTGCTGCGAGAAGCTCGCCAGATACCACAAGTCC
ATACAAATAGCGCGCAAGCTGCGAGGGGAGATCCTGGAACTGATCCACAG
TCCCTACATGTCCAAGGACCACAAGCAGACCTCCTACAAAGAGGACGATC
TCGACCGAGAGACCACCATAAGCAAATTCGATGGGAATATTGAGGAGGCA
CAGCAACAGGACGAGGAGGAGCAGGAACTGGATATCTTGCCCCCCCCCGT
CACCCTGGTCGGTCCCGCCGGAATCAAGGAGGAAGTGGCCGAAGAGGAGC
ACACCTTCATTATCAAACAATCAGAGGAGGAGGATGAGTTCCACTCCGTA
GACTTAGAGCTAGATATCGACAACGAGATTATCATTAACGAAGAGGAAGC
CCACGAGGTAGAGGAGGTGGCCCACGAGATAGAGGAGGTGGCCCACGAGA
TAGAGGAGGAGGATCTGTTGCCACATGACAAGCAAGAGGCCCAGGAGGAA
GACTTTTTTAAGGAAGATACCATGAGTGACTTTGACGAACATCTGGACGG
CGCAATAGAGTACATAATATCCGATGGCGAGGACCAGGAGCAGGACAACG
AAAGCTCCGGCGAATACACGGTCAACATACAATGCCCCAGCTGCCCGGAG
AAGTTCAGCAGCCGGCGCGCTTACAATGTCCACACGAAACGCGAGCACTT
TCCCGGCTACGTCTGTGATCAGTGCGGC
MXO01390.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:07:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7928-PA | 1374 | CG7928-RA | 389..870 | 397..878 | 2335 | 99.3 | Plus |
CG7928-PA | 1374 | CG7928-RA | 1..374 | 9..382 | 1870 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:40:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7928-RA | 1631 | CG7928-RA | 70..939 | 9..878 | 4200 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:40:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30035932..30036801 | 878..9 | 4200 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:40:37 has no hits.
MXO01390.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:12 Download gff for
MXO01390.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7928-PA | 1..870 | 9..878 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:43 Download gff for
MXO01390.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7928-RA | 61..939 | 1..878 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:35 Download gff for
MXO01390.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7928-RA | 61..939 | 1..878 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:35 Download gff for
MXO01390.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30035932..30036810 | 1..878 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:43 Download gff for
MXO01390.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25861654..25862532 | 1..878 | 98 | | Minus |