MXO02002.3prime Sequence
588 bp (588 high quality bases) assembled on 2007-01-18
> MXO02002.3prime
ATGGTCTAGAAAGCTTGCCGTAGCAACAGGAGCCGGAGCAGCTCCCTCCG
GTTCGGCAGCCTTTTCTCCGTTGCCGTTCTGCGCCTTGGCTGCCGGCAGA
TCCTTGACTCCGGTGGAACCGAATCCTGCCTCGCCGCGCTCGGTGTCCTC
CAGTTTGTCCACCATCACCAGTTGCGGATAGAAGATACGCTCGCAAATGA
ACTGGGCGATGCGGTCGCCATGCTTCACCTCGAAATCAACATCTGAGTGA
TTGAACAGGACGACGCCGAGATTGCCGCGATAATCCTCGTCCACCACACC
GGCGCCCACATCAATGAAGTTCTTCACCGCCAGCCCGGATCGTGGGGCTA
CGCGTCCGTAGGAGCCCTCCGGAACCTGCACTTGCAGATCGGTCTTGACA
ATGGCCTTTCCGCGTGCCGGCACCACAACGTCGTAGGCGCTGCGCAGGTC
AACTCCCGCCGCTTTGGCGGATCCCCTCACCGGCTCCAAAGCATTCTCGG
TGAGTTTGGCGAATCGCAGGACGCACGTGTCGATCTTCATCTTCTTGGCA
GCTGGAATGTCGGCGAAATCGGTTGATGGCATGTCGAC
MXO02002.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:52:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4584-PA | 567 | dUTPase-RA | 1..564 | 582..19 | 2820 | 100 | Minus |
| CG4584-PB | 525 | dUTPase-RB | 1..522 | 540..19 | 2610 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dUTPase-RA | 824 | CG4584-RA | 130..693 | 582..19 | 2820 | 100 | Minus |
| dUTPase-RD | 750 | CG4584-RD | 69..619 | 569..19 | 2755 | 100 | Minus |
| dUTPase-RB | 732 | CG4584-RB | 69..601 | 551..19 | 2665 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11011441..11012004 | 582..19 | 2820 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:43:37 has no hits.
MXO02002.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:18 Download gff for
MXO02002.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4584-PA | 1..567 | 15..582 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:05 Download gff for
MXO02002.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dUTPase-RA | 123..696 | 15..588 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:08 Download gff for
MXO02002.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dUTPase-RA | 123..696 | 15..588 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:08 Download gff for
MXO02002.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11011434..11012003 | 20..588 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:05 Download gff for
MXO02002.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11011434..11012003 | 20..588 | 99 | -> | Minus |
MXO02002.5prime Sequence
588 bp (588 high quality bases) assembled on 2007-04-04
> MXO02002.5prime
CAGTCGACATGCCATCAACCGATTTCGCCGACATTCCAGCTGCCAAGAAG
ATGAAGATCGACACGTGCGTCCTGCGATTCGCCAAACTCACCGAGAATGC
TTTGGAGCCGGTGAGGGGATCCGCCAAAGCGGCGGGAGTTGACCTGCGCA
GCGCCTACGACGTTGTGGTGCCGGCACGCGGAAAGGCCATTGTCAAGACC
GATCTGCAAGTGCAGGTTCCGGAGGGCTCCTACGGACGCGTAGCCCCACG
ATCCGGGCTGGCGGTGAAGAACTTCATTGATGTGGGCGCCGGTGTGGTGG
ACGAGGATTATCGCGGCAATCTCGGCGTCGTCCTGTTCAATCACTCAGAT
GTTGATTTCGAGGTGAAGCATGGCGACCGCATCGCCCAGTTCATTTGCGA
GCGTATCTTCTATCCGCAACTGGTGATGGTGGACAAACTGGAGGACACCG
AGCGCGGCGAGGCAGGATTCGGTTCCACCGGAGTCAAGGATCTGCCGGCA
GCCAAGGCGCAGAACGGCAACGGAGAAAAGGCTGCCGAACCGGAGGGAGC
TGCTCCGGCTCCTGTTGCTACGGCAAGCTTTCTAGACC
MXO02002.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-11 12:07:33 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dUTPase-RA | 824 | CG4584-RA | 130..693 | 9..572 | 2820 | 100 | Plus |
| dUTPase-RD | 750 | CG4584-RD | 69..619 | 22..572 | 2755 | 100 | Plus |
| dUTPase-RB | 732 | CG4584-RB | 69..601 | 40..572 | 2665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11011441..11012004 | 9..572 | 2820 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:43:10 has no hits.
MXO02002.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:47 Download gff for
MXO02002.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dUTPase-RA | 124..696 | 1..576 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:16 Download gff for
MXO02002.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dUTPase-RA | 124..696 | 1..576 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:16 Download gff for
MXO02002.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11011435..11012003 | 1..571 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:47 Download gff for
MXO02002.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11011435..11012003 | 1..571 | 99 | -> | Plus |
