MXO02006.3prime Sequence
738 bp (738 high quality bases) assembled on 2007-01-18
> MXO02006.3prime
ATGGTCTAGAAAGCTTGCGAACATCTTCTTCCTGACCGCCGTATACCGCT
CCATGTAGACATCGTAGCCATCGAGATCGGTGAACTGTTTCGAGTTGAAC
AGATTGCCGTCGACGGCCAGGTTGCAGATTTTCGAGTCCTTGAGGATCTT
GGGTGTAAAGGCCGCTGCCTGAAGGCAGTTCTCCTCGAGCCGCAGTGTCT
TCAGCTTGGGACAATCGGCTACTTCCTCCGCCAGCGAGGATATTTGGTTC
TGGTTAAGGTTCAGTTCGGTCACAAACAGTCCGCCCACATCGGCGGGCAC
ATCGGTGATCTTGTTCCTGGACAGGTCCAGGACATCCAGCTGCTTCAGAC
CGCACAGCATGGAGGGGAACTCCTTCAGCTGATTGTTGCTCAGATTCACG
GTCTTCAGGTGCGTGCAATTGGCCAGGGTTTTGGGCAGCCTTGTCAGCAT
ATTGTCCATCAGCAACAGCACCTCCAGCTTGGCCAGTTCGCCCACCACCT
CGTTGAGTTCCACCAGTCGATTTCCGCTTAGATTGAGGTGCTTGAGTAGC
GTCAGCTTGCCCAGTTCGTCGGGCACACGTTCGAAGCGATTCTCGGAGAG
ATCCAGGGTTTTCAGGACATTCGGGTAGGCCCTTAGCTGCAGTGGGAATT
CTTGCAGCCGCTGCAAGGATATCTTCAGGATTCCCGTCTTCTGGGCCGTC
TCCAGTTGTTGTTTTATCTGTTTATTGCCCATGTCGAC
MXO02006.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:52:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3040-PA | 717 | CG3040-RA | 1..714 | 732..19 | 3570 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3040-RA | 1070 | CG3040-RA | 219..932 | 732..19 | 3570 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6972462..6973175 | 19..732 | 3570 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:47:09 has no hits.
MXO02006.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:20 Download gff for
MXO02006.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3040-PA | 1..717 | 18..732 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:03 Download gff for
MXO02006.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3040-RA | 230..949 | 19..738 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:32:54 Download gff for
MXO02006.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3040-RA | 213..932 | 19..738 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:32:54 Download gff for
MXO02006.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6972462..6973181 | 19..738 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:03 Download gff for
MXO02006.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6866495..6867214 | 19..738 | 99 | | Plus |
MXO02006.5prime Sequence
899 bp (854 high quality bases) assembled on 2007-04-03
> MXO02006.5prime
GCGGCCGCGACGTCCACATATACCTGCCGTTCACTATTATTTAGTGAAAT
GAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCC
CATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGA
TTTTTTAGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCTA
TCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAAT
AGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGG
CAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCCT
TACATATTTTAGGTCTTTTTTTATTGTGCGTAACTAACTTGCCATCTTCA
AACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGA
GACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAA
CCTTTACTACCGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAA
GAAACGAACCAAAAGCCATATAAGGAAACATACGGCATTTCCCATATTAC
ACGCCATGATATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATA
AAGTTCCTGAGTTCGATTCGTCCACAATTAAAAATATCTCTTCTGCAAAA
GGCCTGGACGTTTGGGACAGCTGGCCATTACAAAACACTGACGGCACTGT
CGCAAACTATCACGGCTACCACATCGTCTTTGCATTAGCCGGAGATCCTA
AAAATGCGGATGACACATCGATTTACATGTTCTATCAAAAAGTCGGCGAA
ACTTCTATTGACAGCTGGAAAAACGCTGGCCGCGTCTTTAAAGACAGCG
MXO02006.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-11 12:07:37 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 21:05:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed on 2014-11-28 21:05:08 has no hits.
Blast to na_te.dros performed on 2014-11-28 21:05:09 has no hits.
MXO02006.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 21:41:06 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 21:41:06 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:53:49 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:53:49 has no hits.
