MXO02012.3prime Sequence
546 bp (546 high quality bases) assembled on 2007-01-18
> MXO02012.3prime
ATGGTCTAGAAAGCTTGCCTGATGTGAATAGCCCGTCTTCCTCTTGCGGT
TGAGGAACTTGTACAAGTAGAGGATGCGTTTCTCCATTTCCCGCCACTTG
GTGGGTCGGGCGATGGGATACTTGGACTTCTCGAGCAGCTTACGTTTGCG
GAGAAGCACCTGGTACTCATTGCCGGAGACGCCACGCAGCCAGGATGGCA
GGGAGTAGAGCACCTTGACTGGATGCAGACGATCGTTGCCCAGGATGTCG
ATGTAGTCGTTCTGGCCAAACAACGCACGTTTCTTTGACCAGGCGTTCTT
TGGGCGATACACCGGCATCGGCAGTTTCTGTCCATTGTCCACATGGGGGA
GTAGTCCGCTCTTGAAGATCTTGTCCTCATATCCATAGCGCCGCACAGTG
GGACCGCGTGCTCGTCGCTCGGCATGGGATAACTGCCGCACGGTGTAGCT
GGTTGATGCCATCGGAGCCAAGGGTTTTCCGCCCACAGCAAGGAGCGTGG
CTCTGCCAAGTTTTTGAATCATACTTCCCAGCCAAGACATGTCGAC
MXO02012.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:53:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13098-PA | 525 | mRpL51-RA | 1..522 | 540..19 | 2585 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL51-RA | 628 | CG13098-RA | 88..610 | 541..19 | 2600 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8516771..8517293 | 19..541 | 2600 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:25:10 has no hits.
MXO02012.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:23 Download gff for
MXO02012.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13098-PA | 1..525 | 15..540 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:06 Download gff for
MXO02012.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL51-RA | 83..613 | 15..546 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:36 Download gff for
MXO02012.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL51-RA | 83..613 | 15..546 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:36 Download gff for
MXO02012.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8516767..8517295 | 15..546 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:06 Download gff for
MXO02012.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8516767..8517295 | 15..546 | 98 | | Plus |
MXO02012.5prime Sequence
546 bp (546 high quality bases) assembled on 2007-04-04
> MXO02012.5prime
CAGTCGACATGTCTTGGCTGGGAAGTATGATTCAAAAACTTGGCAGAGCC
ACGCTCCTTGCTGTGGGCGGAAAACCCTTGGCTCCGATGGCATCAACCAG
CTACACCGTGCGGCAGTTATCCCATGCCGAGCGACGAGCACGCGGTCCCA
CTGTGCGGCGCTATGGATATGAGGACAAGATCTTCAAGAGCGGACTACTC
CCCCATGTGGACAATGGACAGAAACTGCCGATGCCGGTGTATCGCCCAAA
GAACGCCTGGTCAAAGAAACGTGCGTTGTTTGGCCAGAACGACTACATCG
ACATCCTGGGCAACGATCGTCTGCATCCAGTCAAGGTGCTCTACTCCCTG
CCATCCTGGCTGCGTGGCGTCTCCGGCAATGAGTACCAGGTGCTTCTCCG
CAAACGTAAGCTGCTCGAGAAGTCCAAGTATCCCATCGCCCGACCCACCA
AGTGGCGGGAAATGGAGAAACGCATCCTCTACTTGTACAAGTTCCTCAAC
CGCAAGACGAAGACGGGCTATTCACATCAGGCAAGCTTTCTAGACC
MXO02012.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-11 12:07:43 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:27:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL51-RA | 628 | CG13098-RA | 88..610 | 8..530 | 2615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:27:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8516771..8517293 | 530..8 | 2615 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:27:58 has no hits.
MXO02012.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:33:41 Download gff for
MXO02012.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL51-RA | 82..613 | 1..534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:35 Download gff for
MXO02012.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL51-RA | 82..613 | 1..534 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:35 Download gff for
MXO02012.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8516767..8517299 | 1..534 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:33:41 Download gff for
MXO02012.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8516767..8517299 | 1..534 | 99 | | Minus |
