Clone MXO02016 Report

Search the DGRC for MXO02016

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:20
Well:16
Vector:pMK33-CTAP-BD
Associated Gene/TranscriptCG15735-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO02016.3prime Sequence

675 bp (675 high quality bases) assembled on 2007-01-18

> MXO02016.3prime
ATGGTCTAGAAAGCTTGCGTTTGCGGGAACCGGCGATCCAGATGCAAGAG
ATGAGGACGTGGGAGACACCGATGGTGACGAGGTGCTGGCCGCAGCTCCG
CTTTCCGGGACGGGCGATGGCCTCGTGTTGAAGAACTGTTTGATGATGCG
CTTGATGTAGTTGCATGAAGTTTCGTTGTTCGAGCTGGACACCACGTTGT
CCACTCGGTACGGCGGCGAGATGGTGACTTCATTTAGGATCTGTATGTTA
AGTCCTTGCCAGGAGACTTCATTGTACCCGTATTGTTTGGCTATCGCTCT
ATAGAGTTCCTGCGCCTCTGGACTGACATCAGCATTCTTAGACTTCAAGT
AGTCCTGTCTTCGCTCAACTGTTTTCCTCAGACGCATTTTGACCTGTTCC
AGATTAAGCTTTTGCGGATCATCAAAGTTGCCGTTGCACTCCTTGATCAC
CTGCACGTTGCTGCAGAGCGAGAGGTTCATCGCGTAGATATCACTCAGCT
CCTCCGTGGACTTGGATCGGCATTTCAGGATAAGCATCTTTGTGTTGTGA
TCGAAGGCCAGCACCTCGCCCTCCACCTCCTCGTTGAAACAGGTCGTACA
GACGACTGTGGATCCGATGCTGAAGCAGTCGTTCACTGCATTCACTGCGC
TCGCAGCGGCAGCGGCCATGTCGAC

MXO02016.3prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:54:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG15735-PA 654 CG15735-RA 1..651 669..19 3255 100 Minus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:16:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG15735-RA 1251 CG15735-RA 542..1192 669..19 3255 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12019181..12019325 669..525 725 100 Minus
X 23542271 X 12019628..12019760 524..392 665 100 Minus
X 23542271 X 12020006..12020138 277..145 665 100 Minus
X 23542271 X 12020535..12020660 144..19 630 100 Minus
X 23542271 X 12019821..12019941 397..277 605 100 Minus
Blast to na_te.dros performed 2014-11-28 22:16:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Ulysses 10653 Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). 4845..4904 61..121 113 67.2 Plus

MXO02016.3prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:25 Download gff for MXO02016.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-PA 1..654 15..669 99   Minus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:56 Download gff for MXO02016.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 536..1195 15..675 99   Minus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:54 Download gff for MXO02016.3prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 536..1195 15..675 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:54 Download gff for MXO02016.3prime
Subject Subject Range Query Range Percent Splice Strand
X 12019175..12019325 525..675 97 -> Minus
X 12019628..12019758 394..524 100 -> Minus
X 12019825..12019941 277..393 100 -> Minus
X 12020007..12020138 145..276 100 -> Minus
X 12020535..12020663 15..144 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:56 Download gff for MXO02016.3prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11913208..11913358 525..675 97 -> Minus
arm_X 11913661..11913791 394..524 100 -> Minus
arm_X 11913858..11913974 277..393 100 -> Minus
arm_X 11914040..11914171 145..276 100 -> Minus
arm_X 11914568..11914696 15..144 98   Minus

MXO02016.5prime Sequence

675 bp (675 high quality bases) assembled on 2007-04-02

> MXO02016.5prime
CAGTCGACATGGCCGCTGCCGCTGCGAGCGCAGTGAATGCAGTGAACGAC
TGCTTCAGCATCGGATCCACAGTCGTCTGTACGACCTGTTTCAACGAGGA
GGTGGAGGGCGAGGTGCTGGCCTTCGATCACAACACAAAGATGCTTATCC
TGAAATGCCGATCCAAGTCCACGGAGGAGCTGAGTGATATCTACGCGATG
AACCTCTCGCTCTGCAGCAACGTGCAGGTGATCAAGGAGTGCAACGGCAA
CTTTGATGATCCGCAAAAGCTTAATCTGGAACAGGTCAAAATGCGTCTGA
GGAAAACAGTTGAGCGAAGACAGGACTACTTGAAGTCTAAGAATGCTGAT
GTCAGTCCAGAGGCGCAGGAACTCTATAGAGCGATAGCCAAACAATACGG
GTACAATGAAGTCTCCTGGCAAGGACTTAACATACAGATCCTAAATGAAG
TCACCATCTCGCCGCCGTACCGAGTGGACAACGTGGTGTCCAGCTCGAAC
AACGAAACTTCATGCAACTACATCAAGCGCATCATCAAACAGTTCTTCAA
CACGAGGCCATCGCCCGTCCCGGAAAGCGGAGCTGCGGCCAGCACCTCGT
CACCATCGGTGTCTCCCACGTCCTCATCTCTTGCATCTGGATCGCCGGTT
CCCGCAAACGCAAGCTTTCTAGACC

MXO02016.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:07:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG15735-PA 654 CG15735-RA 1..651 9..659 3255 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG15735-RA 1251 CG15735-RA 542..1192 9..659 3255 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:59
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12019181..12019325 9..153 725 100 Plus
X 23542271 X 12019628..12019760 154..286 665 100 Plus
X 23542271 X 12020006..12020138 401..533 665 100 Plus
X 23542271 X 12020535..12020660 534..659 630 100 Plus
X 23542271 X 12019821..12019941 281..401 605 100 Plus
Blast to na_te.dros performed 2014-11-28 19:52:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Ulysses 10653 Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). 4845..4904 617..557 113 67.2 Minus

MXO02016.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:25 Download gff for MXO02016.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-PA 1..654 9..663 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:34 Download gff for MXO02016.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 542..1195 9..663 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:27 Download gff for MXO02016.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15735-RA 542..1195 9..663 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:27 Download gff for MXO02016.5prime
Subject Subject Range Query Range Percent Splice Strand
X 12019181..12019325 9..153 100 -> Plus
X 12019628..12019758 154..284 100 -> Plus
X 12019825..12019941 285..401 100 -> Plus
X 12020007..12020138 402..533 100 -> Plus
X 12020535..12020663 534..663 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:34 Download gff for MXO02016.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 11913214..11913358 9..153 100 -> Plus
arm_X 11913661..11913791 154..284 100 -> Plus
arm_X 11913858..11913974 285..401 100 -> Plus
arm_X 11914040..11914171 402..533 100 -> Plus
arm_X 11914568..11914696 534..663 98   Plus