MXO02016.3prime Sequence
675 bp (675 high quality bases) assembled on 2007-01-18
> MXO02016.3prime
ATGGTCTAGAAAGCTTGCGTTTGCGGGAACCGGCGATCCAGATGCAAGAG
ATGAGGACGTGGGAGACACCGATGGTGACGAGGTGCTGGCCGCAGCTCCG
CTTTCCGGGACGGGCGATGGCCTCGTGTTGAAGAACTGTTTGATGATGCG
CTTGATGTAGTTGCATGAAGTTTCGTTGTTCGAGCTGGACACCACGTTGT
CCACTCGGTACGGCGGCGAGATGGTGACTTCATTTAGGATCTGTATGTTA
AGTCCTTGCCAGGAGACTTCATTGTACCCGTATTGTTTGGCTATCGCTCT
ATAGAGTTCCTGCGCCTCTGGACTGACATCAGCATTCTTAGACTTCAAGT
AGTCCTGTCTTCGCTCAACTGTTTTCCTCAGACGCATTTTGACCTGTTCC
AGATTAAGCTTTTGCGGATCATCAAAGTTGCCGTTGCACTCCTTGATCAC
CTGCACGTTGCTGCAGAGCGAGAGGTTCATCGCGTAGATATCACTCAGCT
CCTCCGTGGACTTGGATCGGCATTTCAGGATAAGCATCTTTGTGTTGTGA
TCGAAGGCCAGCACCTCGCCCTCCACCTCCTCGTTGAAACAGGTCGTACA
GACGACTGTGGATCCGATGCTGAAGCAGTCGTTCACTGCATTCACTGCGC
TCGCAGCGGCAGCGGCCATGTCGAC
MXO02016.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:54:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15735-PA | 654 | CG15735-RA | 1..651 | 669..19 | 3255 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:16:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15735-RA | 1251 | CG15735-RA | 542..1192 | 669..19 | 3255 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 12019181..12019325 | 669..525 | 725 | 100 | Minus |
X | 23542271 | X | 12019628..12019760 | 524..392 | 665 | 100 | Minus |
X | 23542271 | X | 12020006..12020138 | 277..145 | 665 | 100 | Minus |
X | 23542271 | X | 12020535..12020660 | 144..19 | 630 | 100 | Minus |
X | 23542271 | X | 12019821..12019941 | 397..277 | 605 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 22:16:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 4845..4904 | 61..121 | 113 | 67.2 | Plus |
MXO02016.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:25 Download gff for
MXO02016.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-PA | 1..654 | 15..669 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:56 Download gff for
MXO02016.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 536..1195 | 15..675 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:54 Download gff for
MXO02016.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 536..1195 | 15..675 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:54 Download gff for
MXO02016.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 12019175..12019325 | 525..675 | 97 | -> | Minus |
X | 12019628..12019758 | 394..524 | 100 | -> | Minus |
X | 12019825..12019941 | 277..393 | 100 | -> | Minus |
X | 12020007..12020138 | 145..276 | 100 | -> | Minus |
X | 12020535..12020663 | 15..144 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:56 Download gff for
MXO02016.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11913208..11913358 | 525..675 | 97 | -> | Minus |
arm_X | 11913661..11913791 | 394..524 | 100 | -> | Minus |
arm_X | 11913858..11913974 | 277..393 | 100 | -> | Minus |
arm_X | 11914040..11914171 | 145..276 | 100 | -> | Minus |
arm_X | 11914568..11914696 | 15..144 | 98 | | Minus |
MXO02016.5prime Sequence
675 bp (675 high quality bases) assembled on 2007-04-02
> MXO02016.5prime
CAGTCGACATGGCCGCTGCCGCTGCGAGCGCAGTGAATGCAGTGAACGAC
TGCTTCAGCATCGGATCCACAGTCGTCTGTACGACCTGTTTCAACGAGGA
GGTGGAGGGCGAGGTGCTGGCCTTCGATCACAACACAAAGATGCTTATCC
TGAAATGCCGATCCAAGTCCACGGAGGAGCTGAGTGATATCTACGCGATG
AACCTCTCGCTCTGCAGCAACGTGCAGGTGATCAAGGAGTGCAACGGCAA
CTTTGATGATCCGCAAAAGCTTAATCTGGAACAGGTCAAAATGCGTCTGA
GGAAAACAGTTGAGCGAAGACAGGACTACTTGAAGTCTAAGAATGCTGAT
GTCAGTCCAGAGGCGCAGGAACTCTATAGAGCGATAGCCAAACAATACGG
GTACAATGAAGTCTCCTGGCAAGGACTTAACATACAGATCCTAAATGAAG
TCACCATCTCGCCGCCGTACCGAGTGGACAACGTGGTGTCCAGCTCGAAC
AACGAAACTTCATGCAACTACATCAAGCGCATCATCAAACAGTTCTTCAA
CACGAGGCCATCGCCCGTCCCGGAAAGCGGAGCTGCGGCCAGCACCTCGT
CACCATCGGTGTCTCCCACGTCCTCATCTCTTGCATCTGGATCGCCGGTT
CCCGCAAACGCAAGCTTTCTAGACC
MXO02016.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:07:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15735-PA | 654 | CG15735-RA | 1..651 | 9..659 | 3255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15735-RA | 1251 | CG15735-RA | 542..1192 | 9..659 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 12019181..12019325 | 9..153 | 725 | 100 | Plus |
X | 23542271 | X | 12019628..12019760 | 154..286 | 665 | 100 | Plus |
X | 23542271 | X | 12020006..12020138 | 401..533 | 665 | 100 | Plus |
X | 23542271 | X | 12020535..12020660 | 534..659 | 630 | 100 | Plus |
X | 23542271 | X | 12019821..12019941 | 281..401 | 605 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 19:52:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 4845..4904 | 617..557 | 113 | 67.2 | Minus |
MXO02016.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:25 Download gff for
MXO02016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-PA | 1..654 | 9..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:34 Download gff for
MXO02016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 542..1195 | 9..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:27 Download gff for
MXO02016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15735-RA | 542..1195 | 9..663 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:27 Download gff for
MXO02016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 12019181..12019325 | 9..153 | 100 | -> | Plus |
X | 12019628..12019758 | 154..284 | 100 | -> | Plus |
X | 12019825..12019941 | 285..401 | 100 | -> | Plus |
X | 12020007..12020138 | 402..533 | 100 | -> | Plus |
X | 12020535..12020663 | 534..663 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:34 Download gff for
MXO02016.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11913214..11913358 | 9..153 | 100 | -> | Plus |
arm_X | 11913661..11913791 | 154..284 | 100 | -> | Plus |
arm_X | 11913858..11913974 | 285..401 | 100 | -> | Plus |
arm_X | 11914040..11914171 | 402..533 | 100 | -> | Plus |
arm_X | 11914568..11914696 | 534..663 | 98 | | Plus |