MXO02024.3prime Sequence
491 bp (398 high quality bases) assembled on 2007-01-18
> MXO02024.3prime
ATGGTCTAGAAAGCTTGCAAGCACAAGAGGCACGGCCTCTGCCACCGGCT
GGTTGATCTCCTGGTGGCGTTGCAGTAATCCCAAGCACTGGTGCAGGCAC
TGGGTGCTGGCCGTGGAGATCGCCTTGAGCAAAAGAAGATCGGGATCCGT
TGGCGAGAAGGAAGCGCAGTCGATGCTCTCGATGGCCCTGGCCAGAGAAG
CGTTGCATTGTTCCGTGAGAAACAGAGCTTGGCGCGCTGAAACCATGGCA
TCGGAGGCGGCAAGCAATTCCCGCGGAGGAAGCGGCGACGAGTTGCTGAT
GTCCATCGCCTTCATGTGACTCTCGACCACCGCCCGCAGGCCATCCACCC
ACTCCTGACGGGCCCTGGCATCGTTGGCCCTCAGCTTTACCGTATCGCCG
GAGGCGCANGCGATGGCGAACGTCCTAGAGTCCTCGTCACTCGGGTACAC
CACTGCGCCCGCCAGCTGCACCTGGCCCTGGAACACTGGCA
MXO02024.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:55:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9205-PA | 675 | CG9205-RA | 213..672 | 478..19 | 2256 | 99.5 | Minus |
CG9205-PB | 675 | CG9205-RB | 213..672 | 478..19 | 2256 | 99.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:45:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9205-RB | 941 | CG9205-RB | 388..861 | 490..19 | 2279 | 98.9 | Minus |
CG9205-RA | 1105 | CG9205-RA | 552..1025 | 490..19 | 2279 | 98.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:45:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1035684..1035956 | 478..206 | 1339 | 99.3 | Minus |
3L | 28110227 | 3L | 1036031..1036218 | 206..19 | 940 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:45:06 has no hits.
MXO02024.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:31 Download gff for
MXO02024.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9205-PB | 199..675 | 16..490 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:39 Download gff for
MXO02024.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9205-RA | 552..1025 | 19..490 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:22 Download gff for
MXO02024.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9205-RA | 552..1025 | 19..490 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:22 Download gff for
MXO02024.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1036032..1036212 | 25..205 | 100 | -> | Minus |
3L | 1035670..1035956 | 206..490 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:39 Download gff for
MXO02024.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1036032..1036212 | 25..205 | 100 | -> | Minus |
arm_3L | 1035670..1035956 | 206..490 | 98 | -> | Minus |
MXO02024.5prime Sequence
697 bp (697 high quality bases) assembled on 2007-04-02
> MXO02024.5prime
CAGTCGACATGGAGAGCAACTTGAACAGGATCATTCGTGAATCGGCCAAA
CTGAAACTCTGCGGTCAGCTCAGCAAATACACCAATGTGATGAAGGGATG
GCAGTACCGTTGGTTTACGGTGGACGCCAAGACAGGATCGCTGAGCTACT
ACCTGTGCGACTCGTCGACGGTGGGCGACGACATCGCGCCCTCGCCCCAC
GTCCTGGCCAGTGCTCCCAGGGGCCAGGTGCAGCTGGCCGGCGCAGTGGT
GTACCCGAGTGACGAGGACTCTAGGACGTTCGCCATCGCCTGCGCCTCCG
GCGATACGGTAAAGCTGAGGGCCAACGATGCCAGGGCCCGTCAGGAGTGG
GTGGATGGCCTGCGGGCGGTGGTCGAGAGTCACATGAAGGCGATGGACAT
CAGCAACTCGTCGCCGCTTCCTCCGCGGGAATTGCTTGCCGCCTCCGATG
CCATGGTTTCAGCGCGCCAAGCTCTGTTTCTCACGGAACAATGCAACGCT
TCTCTGGCCAGGGCCATCGAGAGCATCGACTGCGCTTCCTTCTCGCCAAC
GGATCCCGATCTTCTTTTGCTCAAGGCGATCTCCACGGCCAGCACCCAGT
GCCTGCACCAGTGGCTGGGATTACTGGCACCCCCCCAAGAAAATCACCCA
GCCGTGGCAAAAGGCCGTGCTTCTTGTGCTTGCAAGCTTTCTAGACC
MXO02024.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:07:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9205-PA | 675 | CG9205-RA | 1..618 | 9..626 | 3040 | 99.6 | Plus |
CG9205-PB | 675 | CG9205-RB | 1..618 | 9..626 | 3040 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:06:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9205-RB | 941 | CG9205-RB | 190..861 | 9..681 | 3130 | 97.9 | Plus |
CG9205-RA | 1105 | CG9205-RA | 354..1025 | 9..681 | 3130 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:05:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1035559..1035956 | 96..493 | 1990 | 100 | Plus |
3L | 28110227 | 3L | 1036031..1036218 | 493..681 | 670 | 91.5 | Plus |
3L | 28110227 | 3L | 1035374..1035462 | 9..97 | 445 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:06:01 has no hits.
MXO02024.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:31 Download gff for
MXO02024.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9205-PB | 1..675 | 9..684 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:00 Download gff for
MXO02024.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9205-RA | 346..1025 | 1..681 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:43 Download gff for
MXO02024.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9205-RA | 346..1025 | 1..681 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:43 Download gff for
MXO02024.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1035366..1035461 | 1..96 | 95 | -> | Plus |
3L | 1035560..1035956 | 97..493 | 100 | -> | Plus |
3L | 1036032..1036218 | 494..681 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:00 Download gff for
MXO02024.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1035366..1035461 | 1..96 | 95 | -> | Plus |
arm_3L | 1035560..1035956 | 97..493 | 100 | -> | Plus |
arm_3L | 1036032..1036218 | 494..681 | 92 | | Plus |