MXO02025.3prime Sequence
696 bp (696 high quality bases) assembled on 2007-01-18
> MXO02025.3prime
ATGGTCTAGAAAGCTTGCATTGGCAACAGCTACATCCACGTCGTGCTCAT
CTTTGTCGATGCTTAGCTCAAGCACCGTGTCCTCTTCTACGGACATGGCT
TTAGAGTCCTCAGTAGAGACTGAGTGATATTTGGGCTCGCCGCGGGCTCC
GTCGAACTTTGTGGGAGTGCTATTGTTGAGATCGTCGTCTTCATCGCTTA
CCTCCATGATCCCATTGTCGTCTAGGTCCGGCTCAGAGCGGGCATCGCAA
TCGCTGGACGAGGAGGATGCCGAGGATGAGCTGTCCTGGTCCAGCTGCTG
TTCCAGCTCGTGAATCGTGTACATCAGCAAAGTGAAGTCATTGCGTCGTT
TCTGAAACTTGCGCTCCATCTTTAGCTTCTTTTGCACCAAGTCGTCAATC
TCCCTCCTAATGGTCTCAATATGTCGCTGTGTTTCACTGCGGTCCGGTTG
GTCCTGGATGAGCGAGGCCAGCAGGTCGTACTCCATCTTGTTCTTGCGAA
TCTGCTTGGCAGTGATTAGCTCTTTTTTACTGGATTCGATTTCCGCTTTA
GCCAAAACAATACTTTCTTCGTGGTGTTCAACTAGTTGTGTGTAGTTGTC
ACGCTCACCGGCGATCATCTGCAGAGTTTGTACATTCTTTAACGCAGTGA
GCTTGCACTGGGCGAATTGGGCCATCAGTCGGTCGTACATGTCGAC
MXO02025.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:55:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17143-PB | 864 | thoc7-RB | 189..861 | 691..19 | 3365 | 100 | Minus |
| CG17143-PA | 675 | thoc7-RA | 1..672 | 690..19 | 3360 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| thoc7-RB | 926 | CG17143-RB | 189..861 | 691..19 | 3365 | 100 | Minus |
| thoc7-RA | 929 | CG17143-RA | 192..864 | 691..19 | 3365 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 211701..212373 | 19..691 | 3365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:03:19 has no hits.
MXO02025.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:32 Download gff for
MXO02025.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17143-PB | 182..864 | 18..696 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:04 Download gff for
MXO02025.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| thoc7-RA | 185..870 | 11..696 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:58 Download gff for
MXO02025.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| thoc7-RA | 185..870 | 11..696 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:58 Download gff for
MXO02025.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 211695..212380 | 11..696 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:23:04 Download gff for
MXO02025.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 211695..212380 | 11..696 | 98 | | Plus |
MXO02025.5prime Sequence
696 bp (696 high quality bases) assembled on 2007-04-02
> MXO02025.5prime
CAGTCGACATGTACGACCGACTGATGGCCCAATTCGCCCAGTGCAAGCTC
ACTGCGTTAAAGAATGTACAAACTCTGCAGATGATCGCCGGTGAGCGTGA
CAACTACACACAACTAGTTGAACACCACGAAGAAAGTATTGTTTTGGCTA
AAGCGGAAATCGAATCCAGTAAAAAAGAGCTAATCACTGCCAAGCAGATT
CGCAAGAACAAGATGGAGTACGACCTGCTGGCCTCGCTCATCCAGGACCA
ACCGGACCGCAGTGAAACACAGCGACATATTGAGACCATTAGGAGGGAGA
TTGACGACTTGGTGCAAAAGAAGCTAAAGATGGAGCGCAAGTTTCAGAAA
CGACGCAATGACTTCACTTTGCTGATGTATATTATTCCCCCCCTGGAACA
GCAGCTGGACCAGGACAGCTCATCCTCGGCATCCTCCTCGTCCAGCGATT
GCGATGCCCGCTCTGAGCCGGACCTAGACGACAATGGGATCATGGAGGTA
AGCGATGAAGACGACGATCTCAACAATAGCACTCCCACAAAGTTCGACGG
AGCCCGCGGCGAGCCCAAATATCACTCAGTCTCTACTGAGGACTCTAAAG
CCATGTCCGTAGAAGAGGACACGGTGCTTGAGCTAAGCATCGACAAAGAT
GAGCACGACGTGGATGTAGCTGTTGCCAATGCAAGCTTTCTAGACC
MXO02025.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:07:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17143-PB | 864 | thoc7-RB | 189..560 | 8..379 | 1860 | 100 | Plus |
| CG17143-PA | 675 | thoc7-RA | 1..371 | 9..379 | 1855 | 100 | Plus |
| CG17143-PB | 864 | thoc7-RB | 574..861 | 393..680 | 1440 | 100 | Plus |
| CG17143-PA | 675 | thoc7-RA | 385..672 | 393..680 | 1440 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:20:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| thoc7-RB | 926 | CG17143-RB | 189..861 | 8..680 | 3260 | 99 | Plus |
| thoc7-RA | 929 | CG17143-RA | 192..864 | 8..680 | 3260 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 211701..212373 | 680..8 | 3260 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:20:57 has no hits.
MXO02025.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:32 Download gff for
MXO02025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17143-PB | 180..864 | 1..681 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:28:57 Download gff for
MXO02025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| thoc7-RA | 183..870 | 1..688 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:40 Download gff for
MXO02025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| thoc7-RA | 183..870 | 1..688 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:40 Download gff for
MXO02025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 211695..212382 | 1..688 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:28:57 Download gff for
MXO02025.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 211695..212382 | 1..688 | 97 | | Minus |
