MXO02026.3prime Sequence
510 bp (510 high quality bases) assembled on 2007-01-18
> MXO02026.3prime
ATGGTCTAGAAAGCTTGCTTCTAGATCACCGTGGACACCTAAACGCAGGG
TGATGAGTATGTCCAGCAAGAAGACCAGCGAGGTAACCAAGGCAATCGAG
GCGGAAGCCATCACGAGATCCAAACGATGCATATTCGGGTGCCAGTAGTT
GCGATCCTTGGTGGTGGACCAATCCCGGAAAAGCAGGGCGGTTACGGCCA
CGAAGAGCACAAAGGCCACTAGATTCCACAAAGTAGCCGTACGCCATGGA
GTCAAATCACCGAAGAGCGCCATTATCAGATAGATTGCCGTGTAGATGGT
CAGTGCTCCAAAGGTCACATAGCAAAGGGAAGCCACTCGGGGAGTGATGA
ACACCCGCAGATGAGAATTGGTGGCCGGCTCGTCGATCAGACCCAAACAG
CATATAAGCAGGCACAGTTCCACAATCTTGATGCATATCACCGTGTAGGT
GGCCTTTTTGTTTCCATGAGTTGTGGCAAAGGAATTATCGTCAGCCGGCG
ACATGTCGAC
MXO02026.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:55:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9628-PB | 528 | CG9628-RB | 34..525 | 510..19 | 2435 | 99.7 | Minus |
CG9628-PA | 489 | CG9628-RA | 1..486 | 504..19 | 2430 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9628-RC | 890 | CG9628-RC | 206..697 | 510..19 | 2445 | 99.8 | Minus |
CG9628-RB | 1053 | CG9628-RB | 178..669 | 510..19 | 2445 | 99.8 | Minus |
CG9628-RA | 1125 | CG9628-RA | 250..741 | 510..19 | 2445 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14627556..14627790 | 253..19 | 1175 | 100 | Minus |
3L | 28110227 | 3L | 14627334..14627496 | 415..253 | 815 | 100 | Minus |
3L | 28110227 | 3L | 14627031..14627126 | 510..415 | 465 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:27:21 has no hits.
MXO02026.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:33 Download gff for
MXO02026.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9628-PB | 34..528 | 16..510 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:30 Download gff for
MXO02026.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9628-RA | 250..741 | 19..510 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:35 Download gff for
MXO02026.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9628-RA | 250..741 | 19..510 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:35 Download gff for
MXO02026.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14627031..14627126 | 415..510 | 98 | -> | Minus |
3L | 14627335..14627495 | 254..414 | 100 | -> | Minus |
3L | 14627556..14627790 | 19..253 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:30 Download gff for
MXO02026.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14620131..14620226 | 415..510 | 98 | -> | Minus |
arm_3L | 14620435..14620595 | 254..414 | 100 | -> | Minus |
arm_3L | 14620656..14620890 | 19..253 | 100 | | Minus |
MXO02026.5prime Sequence
510 bp (510 high quality bases) assembled on 2007-04-02
> MXO02026.5prime
CAGTCGACATGTCGCCGGCTGACGATAATTCCTTTGCCACAACTCATGGA
AACAAAAAGGCCACCTACACGGTGATATGCATCAAGATTGTGGAACTGTG
CCTGCTTATATGCTGTTTGGGTCTGATCGACGAGCCGGCCACCAATTCTC
ATCTGCGGGTGTTCATCACTCCCCGAGTGGCTTCCCTTTGCTATGTGACC
TTTGGAGCACTGACCATCTACACGGCAATCTATCTGATAATGGCGCTCTT
CGGTGATTTGACTCCATGGCGTACGGCTACTTTGTGGAATCTAGTGGCCT
TTGTGCTCTTCGTGGCCGTAACCGCCCTGCTTTTCCGGGATTGGTCCACC
ACCAAGGATCGCAACTACTGGCACCCGAATATGCATCGTTTGGATCTCGT
GATGGCTTCCGCCTCGATTGCCTTGGTTACCTCGCTGGTCTTCTTGCTGG
ACATACTCATCACCCTGCGTTTAGGTGTCCACGGTGATCTAGAAGCAAGC
TTTCTAGACC
MXO02026.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:07:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9628-PB | 528 | CG9628-RB | 34..525 | 3..494 | 2435 | 99.7 | Plus |
CG9628-PA | 489 | CG9628-RA | 1..486 | 9..494 | 2430 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:38:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9628-RC | 890 | CG9628-RC | 206..697 | 3..494 | 2445 | 99.8 | Plus |
CG9628-RB | 1053 | CG9628-RB | 178..669 | 3..494 | 2445 | 99.8 | Plus |
CG9628-RA | 1125 | CG9628-RA | 250..741 | 3..494 | 2445 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:38:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14627556..14627790 | 260..494 | 1175 | 100 | Plus |
3L | 28110227 | 3L | 14627334..14627496 | 98..260 | 815 | 100 | Plus |
3L | 28110227 | 3L | 14627031..14627126 | 3..98 | 465 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:38:44 has no hits.
MXO02026.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:33 Download gff for
MXO02026.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9628-PB | 33..528 | 1..497 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:25 Download gff for
MXO02026.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9628-RA | 249..741 | 1..494 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:33 Download gff for
MXO02026.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9628-RA | 249..741 | 1..494 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:33 Download gff for
MXO02026.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14627030..14627126 | 1..98 | 97 | -> | Plus |
3L | 14627335..14627495 | 99..259 | 100 | -> | Plus |
3L | 14627556..14627790 | 260..494 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:25 Download gff for
MXO02026.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14620130..14620226 | 1..98 | 97 | -> | Plus |
arm_3L | 14620435..14620595 | 99..259 | 100 | -> | Plus |
arm_3L | 14620656..14620890 | 260..494 | 100 | | Plus |