MXO02027.3prime Sequence
700 bp (584 high quality bases) assembled on 2007-01-18
> MXO02027.3prime
ATGGTCTAGAAAGCTTGCAAGATCGTCGAAAGAATCCAATCCGCCGCCCG
TCTCCTTGCCAAGCTTCGCCTTATCCTGACTCTCGGTCCAAGCTTTGGCG
ATCATCTGCTTCGTCTTGGAGTCACCGTCGTTGTACATCTTCTTCATGAT
GTTAACAAGCGCCGATTCGGGATTGTCGCCATCTTTGGACAATTCGCTGT
CCTTCTTTTGCTTCAAACGCTTCTGGATAGCGGTGAGCACATCCCAGTGC
TTGTCCTCAACCTTCTGCAGATAGATGGCCACCATGTCGGTCTTGATCTT
TCGGTAGCTCTTCTCCACATCGATACTGTGCAGCAGATTGTTTACGGTCA
GCCCAAAGTCCTTGCCCTGAAGATCGCGCACATGGAGCTGCAACGAGTTA
GGTGTGTAGGTGACTGTCACATTCTCCTCCGTGCAGCCCTGCACTCCGTT
CAAGGTGATGAAGAGCTTCACGAACTTGGCGCTCTGGTCCCAGCCGTAGT
CGGTCAGCTCGTGCAGATATCTCTTGGCTTCGCTCGACCCGGTGGCCTGT
CGCTCTGCCGCAATTTTGGCCTTCAACTCCAGATTGATCATCTCCCGTTC
CGCCTCCGCTTTAGCGGTGGTCAGCACGTCTTTTACGCGGGCACCTTTCG
CCTGCTGCAGGAAGGCCGCCAGCTCGGCCACATCGGTTTTCAGCTGTTCC
MXO02027.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:55:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3226-PA | 693 | CG3226-RA | 9..690 | 700..19 | 3335 | 99.5 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3226-RA | 894 | CG3226-RA | 97..778 | 700..19 | 3365 | 99.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6653229..6653732 | 19..522 | 2520 | 100 | Plus |
X | 23542271 | X | 6653908..6654084 | 521..697 | 840 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:47:29 has no hits.
MXO02027.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:34 Download gff for
MXO02027.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3226-PA | 9..693 | 18..700 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:16 Download gff for
MXO02027.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3226-RA | 97..778 | 19..700 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:33:05 Download gff for
MXO02027.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3226-RA | 97..778 | 19..700 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:33:05 Download gff for
MXO02027.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6653229..6653730 | 19..520 | 100 | <- | Plus |
X | 6653908..6654084 | 521..700 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:16 Download gff for
MXO02027.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6547262..6547763 | 19..520 | 100 | <- | Plus |
arm_X | 6547941..6548117 | 521..700 | 96 | | Plus |
MXO02027.5prime Sequence
617 bp (602 high quality bases) assembled on 2007-04-02
> MXO02027.5prime
CAGTCGACATGTCATTGGAACAGCTGAAAAGCGATGTGGCCGAGCTGGCG
GCCTTCCTGCAGCAGGCGAAAGGTGCCCGCGTAAAAGACGTGCTGACCAC
CGCTAAAGCGGAGGCGGAACGGGAGATTGTCAATCTGGAGTTGAAGGCCA
AAATTGCGGCAGAGCGACAGGCCACCGGGTCGAGCGAAGCCAAGAGATAT
CTGCACGAGCTGACCGACTACGGCTGGGACCAGAGCGCCAAGTTCGTGAA
GCTCTTCATCACCTTGAACGGAGTGCAGGGCTGCACGGAGGAGAATGTGA
CAGTCACCTACACACCTAACTCGTTGCAGCTCCATGTGCGCGATCTTCAG
GGCAAGGACTTTGGGCTGACCGTAAACAATCTGCTGCACAGTATCGATGT
GGAGAAGAGCTACCGAAAGATCAAGACCGACATGGTGGCCATCTATCTGC
AGAAGGTTGAGGACAAGCACTGGGATGTGCTCACCGCTATCCAGAAGCGT
TTGAAGCAAAAGAAGGACAGCGAATTGTCCAAAGATGGCGACAATCCCGA
ATCGGCGCTTGTTAACATCATGAAGAAGATGTACAACGACGGTGACTCCA
AGACGAATCAGATGATC
MXO02027.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:07:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3226-PA | 693 | CG3226-RA | 1..609 | 9..617 | 3020 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3226-RA | 894 | CG3226-RA | 89..697 | 9..617 | 3030 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6653310..6653732 | 617..195 | 2100 | 99.8 | Minus |
X | 23542271 | X | 6653908..6654084 | 196..20 | 885 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:10:21 has no hits.
MXO02027.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:34 Download gff for
MXO02027.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3226-PA | 1..609 | 9..617 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:07 Download gff for
MXO02027.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3226-RA | 89..697 | 9..617 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:37 Download gff for
MXO02027.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3226-RA | 89..697 | 9..617 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:37 Download gff for
MXO02027.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6653310..6653730 | 197..617 | 99 | <- | Minus |
X | 6653908..6654084 | 20..196 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:07 Download gff for
MXO02027.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6547343..6547763 | 197..617 | 99 | <- | Minus |
arm_X | 6547941..6548117 | 20..196 | 100 | | Minus |