MXO02032.3prime Sequence
724 bp (609 high quality bases) assembled on 2007-01-18
> MXO02032.3prime
ATGGTCTAGAAAGCTTGCCGCAGGTTGCTTCTGCACCTTCGCCAATTCTG
CCTTGAACTTCGAAATGGTCTCACGTGCCAGCTTTAGTTTGTCCTTAAGT
GTAACAATCTCCCCCTTGACCTTCTGTTTTACATTCACAATGTTGTCCAA
CGTTTTCGTCTTCTTTTCCTCAAAGTCAGTGTCATGGGTTAGCAACCCAT
TGGCGCTCTGTTCTGAAAGCAGGAGATAATGCTGCAAGATCTGGGTGGGC
TCCTGGAACACTATTTCCTCATACGACTCCGAGACCAGGCCCTTCTTAGT
GTCCATAGTGGTGCTAGAGGAGAGCTCGCCATCGACCACAGGCGATTGGA
AGAGCTTAAGGATGTGGTAGCAGGTAACCGGGCGCTCTGATTGATCGTTG
AAGTATATCTTGATGATCACCTCGAATTCACCCCATCCGGTCTCGGTAAT
CTCGTAGGGCGGCTTAACTACGATCCTGTTCGGATTAGCGTAGCTCTCGT
GCAGCTTGAAATGCACCTTTTTCACGTAAATGGACATGTCCTCGTTGAAA
TAGGGCTTCAAATAGACTTTCCACTGATGCGTGTGTCCGTCCTCCTCGCG
CTTCTTGCCGAAGATCTGGCATGTTTCCTACCTATGGGCTTACTATAGTT
ACGCCCTTAGTCGGCACCCAGTCTCGCCAAGTCAGTCATGTCACTGATAC
TTCTATATGTATGCTAACGATTAT
MXO02032.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:56:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9207-PA | 684 | Gas41-RA | 37..681 | 658..19 | 3025 | 99.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:16:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gas41-RA | 840 | CG9207-RA | 92..772 | 689..19 | 3155 | 98.5 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6949591..6950030 | 174..613 | 2200 | 100 | Plus |
| 2L | 23513712 | 2L | 6949378..6949532 | 19..173 | 775 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:16:51 has no hits.
MXO02032.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:37 Download gff for
MXO02032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9207-PA | 1..684 | 15..689 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:59 Download gff for
MXO02032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gas41-RA | 92..775 | 15..689 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:03:59 Download gff for
MXO02032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gas41-RA | 92..775 | 15..689 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:03:59 Download gff for
MXO02032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6949374..6949532 | 15..173 | 98 | <- | Plus |
| 2L | 6949591..6950082 | 174..659 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:59 Download gff for
MXO02032.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6949374..6949532 | 15..173 | 98 | <- | Plus |
| arm_2L | 6949591..6950082 | 174..659 | 98 | -> | Plus |
MXO02032.5prime Sequence
705 bp (699 high quality bases) assembled on 2007-04-02
> MXO02032.5prime
CAGTCGACATGACTGACTTTGGCGCCCACTCGGGTGGCCGACTAAAGGGC
GTAACTATAGTAAAGCCCATAGTGTATGGAAACATTGCCAGATCCTTCGG
CAAGAAGCGCGAGGAGGACGGACACACGCATCAGTGGAAAGTCTATTTGA
AGCCCTATTTCAACGAGGACATGTCCATTTACGTGAAAAAGGTGCATTTC
AAGCTGCACGAGAGCTACGCTAATCCGAACAGGATCGTAGTTAAGCCGCC
CTACGAGATTACCGAGACCGGATGGGGTGAATTCGAGGTGATCATCAAGA
TATACTTCAACGATCAATCAGAGCGCCCGGTTACCTGCTACCACATCCTT
AAGCTCTTCCAATCGCCTGTGGTCGATGTTTAGCCCCCCCCCAGCACCAC
TATGGACACTAAGAAGGGCCTGGTCTCGGAGTCGTATGAGGAAATAGTGT
TCCAGGAGCCCACCCAGATCTTGCAGCATTATCTCCTGCTTTCAGAACAG
AGCGCCAATGGGTTGCTAACCCATGACACTGACTTTGAGGAAAAGAAGAC
GAAAACGTTGGACAACATTGTGAATGTAAAACAGAAGGTCAAGGGGGAGA
TTGTTACACTTAAGGACAAACTAAAGCTGGCACGTGAGACCATTTCGAAG
TTCAAGGCAGAATTGGCGAAGGTGCAGAAGCAACCTGCGGCAAGCTTTCT
AGACC
MXO02032.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:08:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9207-PA | 684 | Gas41-RA | 20..370 | 28..378 | 1755 | 100 | Plus |
| CG9207-PA | 684 | Gas41-RA | 385..681 | 393..689 | 1485 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gas41-RA | 840 | CG9207-RA | 92..772 | 9..689 | 3255 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6949591..6950116 | 534..9 | 2480 | 98.1 | Minus |
| 2L | 23513712 | 2L | 6949378..6949532 | 689..535 | 775 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:07:21 has no hits.
MXO02032.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:38 Download gff for
MXO02032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9207-PA | 1..684 | 9..693 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:17 Download gff for
MXO02032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gas41-RA | 84..775 | 3..693 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:25 Download gff for
MXO02032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gas41-RA | 84..775 | 3..693 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:25 Download gff for
MXO02032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6949374..6949532 | 535..693 | 98 | <- | Minus |
| 2L | 6949591..6950124 | 3..534 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:17 Download gff for
MXO02032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6949374..6949532 | 535..693 | 98 | <- | Minus |
| arm_2L | 6949591..6950124 | 3..534 | 97 | | Minus |
