MXO02036.3prime Sequence
699 bp (696 high quality bases) assembled on 2007-01-18
> MXO02036.3prime
ATGGTCTAGAAAGCTTGCCTTCTGCTGTCGCTCAGCCAAAAGTCCCTTAA
CCAGTCCCACCAACATATCCAGACCTTCCTGATTGTTTTTCTGGTAGTAT
GGAAGGGCCTGAATGCGCTTGACCCACTGTACCAGGCGTGGAAACTGATC
CGGCTCGATTGGCGCAAAAGCCTCGGCCGTGGACACCGATGCGATGCAGC
TGAGATCGGCGATGGTCAGCTTGTCGCCCACCAAGTAATCACCTTCAGCC
AGACAGTGCTCCAAGCCATCATAGGCCTTCTGAAGGTAGGCCACTCGATC
GCTGGGCACCTCGCCAGCTCCGAAATAGATCACCGGCTCGACAATGAAAC
GGATTCGCGGGAATAGATGACCGCAATCGTAGTACAAACGGGCATCCACC
AGGCGCCGCTTCTCCGGATCCTTTGGATACAGGGAATCATCGCCCTCCGG
TGCGTACTTATCTGCCAGATAGCTGCAGATAATGTGCGAATCGCTCACGA
TGGTGCCGTTATCATCGAGCATGGGGATCGTGTGCTGCGCATTCAACTTG
AGAAACTCGGCGGATTTGTGCTCTCCGGCCTTTACGTTGACCAGTCGCAA
GTCCAACTCCAAACCGAGGGCGGCGGCCGTCAGCAGAACAGCACGACAGG
GGGGACTACGGGGAGCGTAATAGAGGATGGGTTTGGCCGACATGTCGAC
MXO02036.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:56:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5224-PA | 678 | CG5224-RA | 1..675 | 693..19 | 3350 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstE11-RB | 943 | CG5224-RB | 66..740 | 693..19 | 3360 | 99.9 | Minus |
| GstE11-RA | 762 | CG5224-RA | 66..740 | 693..19 | 3360 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:28:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18504245..18504822 | 596..19 | 2875 | 99.8 | Minus |
| 2R | 25286936 | 2R | 18503752..18503849 | 693..596 | 490 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:28:20 has no hits.
MXO02036.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:40 Download gff for
MXO02036.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5224-PA | 1..678 | 15..693 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:52 Download gff for
MXO02036.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE11-RA | 61..743 | 15..699 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:48 Download gff for
MXO02036.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstE11-RA | 61..743 | 15..699 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:48 Download gff for
MXO02036.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18503747..18503849 | 596..699 | 97 | -> | Minus |
| 2R | 18504246..18504825 | 15..595 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:52 Download gff for
MXO02036.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14391252..14391354 | 596..699 | 97 | -> | Minus |
| arm_2R | 14391751..14392330 | 15..595 | 99 | | Minus |
MXO02036.5prime Sequence
822 bp (789 high quality bases) assembled on 2007-04-03
> MXO02036.5prime
GCGGCCGCGACGTCCACATATACCTGCCGTTCACTATTATTTAGTGAAAT
GAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCC
CATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGA
TTTTTTAGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCTA
TCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAAT
AGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGG
CAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCCT
TACATATTTTAGGTCTTTTTTTATTGTGCGTAACTAACTTGCCATCTTCA
AACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGA
GACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAA
CCTTTACTACCGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAA
GAAACGAACCAAAAGCCATATAAGGAAACATACGGCATTTCCCATATTAC
ACGCCATGATATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATA
AAGTTCCTGAGTTCGATTCGTCCACAATTAAAAATATCTCTTCTGCAAAA
GGCCTGGACGTTTGGGACAGCTGGCCATTACAAAACACTGACGGCACTGT
CGCAAACTATCACGGCTACCACATCGTCTTTGCATTAGCCGGAGATCCTA
AAAATGCGGATGACACATCGAT
MXO02036.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-11 12:08:08 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 20:02:19 has no hits.
Blast to na_all.dmel.RELEASE6 performed on 2014-11-28 20:02:17 has no hits.
Blast to na_te.dros performed on 2014-11-28 20:02:18 has no hits.
MXO02036.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:49:32 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:49:32 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:25:38 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:25:38 has no hits.
