MXO02042.5prime Sequence
579 bp (579 high quality bases) assembled on 2007-04-02
> MXO02042.5prime
CAGTCGACATGGGCGTAGCCAGCATGTTGCAGATTGACGAGATGCTGGGC
GACTTCAACAGAATGAACAAGCGTCAGTCGCTGTACCAGGTGCTGAGCTT
CGCCATGATCGTCTCCTCGGCGCTGATGATCTGGAAGGGCCTGATGGTGG
TCACCGGCAGCGAGTCGCCGATCGTTGTCGTGCTCAGTGGCAGCATGGAG
CCGGCTTTCCACCGCGGCGACCTCCTCTTCCTCACTAACTACAAGGAGGA
GCCGGTGCGCGTCGGCGAGATCGTCGTCTTCAAGGTGGAGGGCAGGGACA
TACCCATTGTACACCGCGTCATCAAGCTGCACGAAAAAGAGGACGGATCC
GTCAAGTTCCTGACCAAGGGCGACAATAACAACGTGGACGACCGGGGCCT
GTATGCACCCAACCAGCTGTGGCTGACCAAAAAGGACATTGTGGGCCGGG
CCAGGGGCTTCCTGCCTTACGTGGGCATCATCACGATCTTCATGAACGAA
TATCCCAAGGTTAAGTGGGCCATTCTCTCTATTTTGGCCATTTTCGTGCT
GCTGCATCGGGAGGCAAGCTTTCTAGACC
MXO02042.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:08:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2358-PA | 558 | CG2358-RA | 1..555 | 9..563 | 2775 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:01:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| twr-RA | 855 | CG2358-RA | 147..702 | 8..563 | 2780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:01:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6658165..6658427 | 75..337 | 1315 | 100 | Plus |
| 3R | 32079331 | 3R | 6659003..6659180 | 338..515 | 890 | 100 | Plus |
| 3R | 32079331 | 3R | 6658028..6658097 | 8..77 | 350 | 100 | Plus |
| 3R | 32079331 | 3R | 6659240..6659289 | 514..563 | 250 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 22:01:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 5786..5861 | 407..482 | 110 | 65.8 | Plus |
MXO02042.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:44 Download gff for
MXO02042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2358-PA | 1..558 | 9..564 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:49 Download gff for
MXO02042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| twr-RA | 143..702 | 1..563 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:26 Download gff for
MXO02042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| twr-RA | 143..702 | 1..563 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:26 Download gff for
MXO02042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6658024..6658097 | 1..77 | 96 | -> | Plus |
| 3R | 6658168..6658427 | 78..337 | 100 | -> | Plus |
| 3R | 6659003..6659180 | 338..515 | 100 | -> | Plus |
| 3R | 6659242..6659289 | 516..563 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:49 Download gff for
MXO02042.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2483746..2483819 | 1..77 | 96 | -> | Plus |
| arm_3R | 2483890..2484149 | 78..337 | 100 | -> | Plus |
| arm_3R | 2484725..2484902 | 338..515 | 100 | -> | Plus |
| arm_3R | 2484964..2485011 | 516..563 | 100 | | Plus |
