MXO02044.3prime Sequence
417 bp (385 high quality bases) assembled on 2007-01-18
> MXO02044.3prime
ATGGTCTAGAAAGCTTGCTAAATACTCGGCTAAAATCTGTCTGAGATCCG
AGTTGTAAACACTTTCCAGGGCCGCCAACACTCGATCGTCAGCAAGTAGC
TCCATTAGCCTTCTGTCCTCCTTGACTGCCTCGAAAGTGGGATACATGAG
CTCGCTGGTGACATCGGTTACTGCCGGCTTGTTCATGATGCTAAGAATCT
TCTTCTGCAGCTCGATCTCTGGATCGGGAGCTTTTAGCTTGGCCAGAGCA
TTGGCCTCGCCCACCTCTCGCTTCAGTTGCTCCTCGCGTTCGCCTTCGAG
GTACTTAAGAATCACCTCGTACTGCGACGCGGTCAATGGATGATTGTCTG
CCAGCCTTTCCAGCAGCCCCTGCATTTCCTGGGGATGTCGCCGCTGTCCC
TTGTGTATGGATGTTGA
MXO02044.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:57:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8614-PA | 1116 | Neos-RA | 715..1113 | 417..19 | 1970 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Neos-RB | 1260 | CG8614-RB | 773..1171 | 417..19 | 1980 | 99.7 | Minus |
| Neos-RA | 1449 | CG8614-RA | 962..1360 | 417..19 | 1980 | 99.7 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7242652..7243050 | 417..19 | 1980 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:26:43 has no hits.
MXO02044.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:44 Download gff for
MXO02044.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8614-PA | 716..1116 | 18..416 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:17 Download gff for
MXO02044.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Neos-RA | 963..1360 | 19..416 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:25 Download gff for
MXO02044.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Neos-RA | 963..1360 | 19..416 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:25 Download gff for
MXO02044.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7242653..7243050 | 19..416 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:17 Download gff for
MXO02044.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7235753..7236150 | 19..416 | 99 | | Minus |
MXO02044.5prime Sequence
782 bp (774 high quality bases) assembled on 2007-04-03
> MXO02044.5prime
GCGGCCGCGACGTCCACATATACCTGCCGTTCACTATTATTTAGTGAAAT
GAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCC
CATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGA
TTTTTTAGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCTA
TCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAAT
AGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGG
CAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCCT
TACATATTTTAGGTCTTTTTTTATTGTGCGTAACTAACTTGCCATCTTCA
AACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGA
GACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAA
CCTTTACTACCGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAA
GAAACGAACCAAAAGCCATATAAGGAAACATACGGCATTTCCCATATTAC
ACGCCATGATATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATA
AAGTTCCTGAGTTCGATTCGTCCACAATTAAAAATATCTCTTCTGCAAAA
GGCCTGGACGTTTGGGACAGCTGGCCATTACAAAACACTGACGGCACTGT
CGCAAACTATCACGGCTACCACATCGTCTTTG
MXO02044.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-11 12:08:16 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 19:10:29 has no hits.
Blast to na_all.dmel.RELEASE6 performed on 2014-11-28 19:10:27 has no hits.
Blast to na_te.dros performed on 2014-11-28 19:10:28 has no hits.
MXO02044.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 19:41:59 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 19:41:59 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:24:58 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:24:58 has no hits.
