MXO02053.3prime Sequence
848 bp (805 high quality bases) assembled on 2007-01-18
> MXO02053.3prime
ATGGTCTAGAAAGCTTGCCGTGGAAAGTGTGAACGGTTCCTGGTGCACCA
CCTGACCCTCGATGCCGTAAAAGATGGTGCCATCCTGGACATATCCCCAC
GCCATGCGACGCGACGTGAAACTGATGCCCAGGTCACCGGAGTGGCCAAC
CACGATGGCGCCACCAGTGCCACCCAGCCGTTTGGTCATCTCGCGGCACT
CCTTGTCGGCGGCTGCCTGGGCGGACAGTCCCTGGTACTCCATGGCGGAC
AGAATGCGCTGGGCCAGATTGTAACGCATGAGGGTCTCGCCATGTCCGGT
GGTGGAGACGCCTCCACGGCAGTTATCCGCATAGGTGCCGCTGCCGAGAA
TGGGTGTGTCCCCAATGCGACCCGGCCACTTGCCGGTGATGCCGCCGGTG
GAGGTGCCCACCACTATTTGGCCCGATGCGTCCATGGCAACCGCTCCGAC
TGTTTCGCCACTGGGATCCGTTTTCGGCACCGGCTTGTCATCGGTCAGTT
CGGTGCGCGCGAAGAAGGGATCCTTGCCCTGGGCCACCTGATCCTCGAAT
TCCTTCAGCGTTAAGCGAGCCCCCTCGGTGACCAGTGCTCCCGGCTGCAG
TCGTTCGCTGCCCGTGGCTAGTGCCAGCTCCTGGGCCGCTGCGCCGCCAA
GAAAGGTGTGTCGCTGCTTCTCCATCAGGCGACGCGCCACTGTAATCGGG
TGCATCACATCCCGCAGCAGGGTTATGCAGCCGGCTCGCAAGTCGCGGCC
CTCCATTAAACTGGCCTCTAGCTCCACCTGGCCACTGGTGTTCAGGCAGG
AGCCGTAGCCGGCGTTGAAAGTCTCGTCCAGCTCCATGCTGCGCACCG
MXO02053.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:58:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7860-PA | 999 | CG7860-RA | 167..996 | 848..19 | 4100 | 99.7 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:45:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7860-RB | 1204 | CG7860-RB | 246..1075 | 848..19 | 4120 | 99.8 | Minus |
| CG7860-RA | 1377 | CG7860-RA | 419..1248 | 848..19 | 4120 | 99.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:45:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15569411..15570240 | 848..19 | 4120 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:45:17 has no hits.
MXO02053.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:49 Download gff for
MXO02053.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7860-PA | 167..999 | 15..848 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:48 Download gff for
MXO02053.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7860-RA | 419..1253 | 12..848 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:31 Download gff for
MXO02053.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7860-RA | 419..1253 | 12..848 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:31 Download gff for
MXO02053.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15569411..15570245 | 12..848 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:48 Download gff for
MXO02053.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15463444..15464278 | 12..848 | 99 | | Minus |
MXO02053.5prime Sequence
804 bp (714 high quality bases) assembled on 2007-04-02
> MXO02053.5prime
CAGTCGACATGCCACGCCCAGTTCTGCTCATTCACGGTGGAGCCGGTGAT
ATATCGGACTCCAGGATAGCGGGCAAGTTCGCGGGCATTAAGCAGGCACT
GCGCTCCGCCTGGGGGCTACTGAGTCCGGACAATGGCAGCGGCGGAGGCA
GTGCCCTGGATGCCGTAGAGGCGGCGGTGCGCAGCATGGAGCTGGACGAG
AACTTCAACGCCGGCTACGGCTCCTGCCTGAACACCAGTGGCCAGGTGGA
GCTAGAGGCCAGTTTAATGGAGGGCCGCGACTTGCGAGCCGGCTGCATAA
CCCTGCTGCGGGATGTGATGCACCCGATTACAGTGGCGCGTCGCCTGATG
GAGAAGCAGCGACACACCTTTCTTGGCGGTTCACCGCCCCACGAGCTGGC
ACTAGCCACGGGCAGCAAACGACTGCAGCCGGGAGCACTGGTCACCGAGG
GGGCTCGCTTAACGCTGAAGGAATTCGAGGATCAGGTGGCCCAGGGCAAG
GATCCCTTCTTCGCGCGCACCGAACTGACCGATGACAAGCCGGTGCCGAA
AACGGATCCCAGTGGCGAAACAGTCGGAGCGGTTGCCATGGACGCATCGG
GCCAAATAGTGGTGGGCACCTCCACCGGCGGCATCACCGGCAAGTGGCCG
GGTCGCATTGGGGACACACCCATTCTCGGCAGCGGCACCTATGCGGATAA
CTGCCGTGGAGGCGTCTCCACCACCGGACATGGCGAGACCCTCCTGCGTT
ACAACCTGGCCCAGCGCATTCTGTCCGCCATGGAGTACCAGGGACTGTCC
GCCC
MXO02053.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:08:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7860-PA | 999 | CG7860-RA | 385..796 | 393..804 | 1985 | 99.2 | Plus |
| CG7860-PA | 999 | CG7860-RA | 1..371 | 9..379 | 1855 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7860-RB | 1204 | CG7860-RB | 75..875 | 4..804 | 3870 | 98.9 | Plus |
| CG7860-RA | 1377 | CG7860-RA | 248..1048 | 4..804 | 3870 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15569240..15570040 | 4..804 | 3870 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:42:09 has no hits.
MXO02053.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:50 Download gff for
MXO02053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7860-PA | 1..796 | 9..804 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:16 Download gff for
MXO02053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7860-RA | 246..1048 | 1..804 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:29 Download gff for
MXO02053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7860-RA | 246..1048 | 1..804 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:29 Download gff for
MXO02053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15569238..15570040 | 1..804 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:16 Download gff for
MXO02053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15463271..15464073 | 1..804 | 98 | | Plus |
