MXO02057.3prime Sequence
745 bp (744 high quality bases) assembled on 2007-01-18
> MXO02057.3prime
ATGGTCTAGAAAGCTTGCGAAGAATTGCTTGGCCAGTTGGATAATATTCA
TGGCCAATCGGATCTCCCGGGCGCCGCGAACGCCCAGTGCCGCCAAGTCC
TCCAGGGTCATTTGGATGAGCACCTCGATGTCGATCTCCTGGCGCGTGAA
CAGCTCTGTGAGATGCGCGTTTCCGGTGCGATCGAGCAGGGATTTGACCC
GAGGACTCAAAGTGGGGTGCTCCACCGGGGAGCAGGGCTTATAGCGTGAA
TGATGGATACTGGGAGTGGGACTTCTTGGGTCCTCCACTTTAATCTTTCG
CGCACTTTTCAACTTGGATTCCTCCTGCCTCAGCCGCGTTTCCTGCTGCA
GTCGGATATCCGGCTTTGGTCTGTCTTCTCTCTTAGTTCTCAGTAGTTTC
GAATCTCCAGATTCTCCCAGTAGCCTGGTCTCCCCATTTATAAGGGTACT
TTGACTTGTGGGCGAAAATACGGAACGCGTGCGCATAAATTTCTGTGAAA
ATCGACGGGGCAAAGTGGATTCCGATAGTCGTTTTAACCCGGACAATGCC
GGTCGACTGTTAGGAACCGTAAGATTATTGTTCTTCGGCATTCCAAAGAG
TCCGTATCTCGCGGTACCCTTCCTGCCAACGCCTCCAGTGGGCGTGACAT
CTTCGAATGTAAAAGCTTCGGTGGAGAGGGGAGTGAGTGGGGTCAGTGGG
GATGCGGGATCTCTATAGACGCGATTGTAGCGCTCCATGTCGACT
MXO02057.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:59:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5272-PA | 723 | gnu-RA | 1..720 | 738..19 | 3600 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gnu-RA | 923 | CG5272-RA | 102..821 | 738..19 | 3600 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14802482..14803175 | 19..712 | 3470 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:22:23 has no hits.
MXO02057.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:52 Download gff for
MXO02057.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5272-PA | 1..723 | 16..738 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:59 Download gff for
MXO02057.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gnu-RA | 97..821 | 19..745 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:11 Download gff for
MXO02057.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gnu-RA | 97..821 | 19..745 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:11 Download gff for
MXO02057.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14802482..14803173 | 19..710 | 100 | <- | Plus |
3L | 14803232..14803264 | 711..745 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:59 Download gff for
MXO02057.3prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14795582..14796273 | 19..710 | 100 | <- | Plus |
arm_3L | 14796332..14796364 | 711..745 | 91 | | Plus |
MXO02057.5prime Sequence
744 bp (744 high quality bases) assembled on 2007-04-02
> MXO02057.5prime
CAGTCGACATGGAGCGCTACAATCGCGTCTATAGAGATCCCGCATCCCCA
CTGACCCCACTCACTCCCCTCTCCACCGAAGCTTTTACATTCGAAGATGT
CACGCCCACTGGAGGCGTTGGCAGGAAGGGTACCGCGAGATACGGACTCT
TTGGAATGCCGAAGAACAATAATCTTACGGTTCCTAACAGTCGACCGGCA
TTGTCCGGGTTAAAACGACTATCGGAATCCACTTTGCCCCGTCGATTTTC
ACAGAAATTTATGCGCACGCGTTCCGTATTTTCGCCCACAAGTCAAAGTA
CCCTTATAAATGGGGAGACCAGGCTACTGGGAGAATCTGGAGATTCGAAA
CTACTGAGAACTAAGAGAGAAGACAGACCAAAGCCGGATATCCGACTGCA
GCAGGAAACGCGGCTGAGGCAGGAGGAATCCAAGTTGAAAAGTGCGCGAA
AGATTAAAGTGGAGGACCCAAGAAGTCCCACTCCCAGTATCCATCATTCA
CGCTATAAGCCCTGCTCCCCGGTGGAGCACCCCACTTTGAGTCCTCGGGT
CAAATCCCTGCTCGATCGCACCGGAAACGCGCATCTCACAGAGCTGTTCA
CGCGCCAGGAGATCGACATCGAGGTGCTCATCCAAATGACCCTGGAGGAC
TTGGCGGCACTGGGCGTTCGCGGCGCCCGGGAGATCCGATTGGCCATGAA
TATTATCCAACTGGCCAAGCAATTCTTCGCAAGCTTTCTAGACC
MXO02057.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:08:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5272-PA | 723 | gnu-RA | 1..720 | 9..728 | 3600 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:01:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gnu-RA | 923 | CG5272-RA | 102..821 | 9..728 | 3600 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:01:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14802482..14803175 | 728..35 | 3470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:01:22 has no hits.
MXO02057.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:52 Download gff for
MXO02057.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5272-PA | 1..723 | 9..731 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:59 Download gff for
MXO02057.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gnu-RA | 96..821 | 1..728 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:35 Download gff for
MXO02057.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
gnu-RA | 96..821 | 1..728 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:35 Download gff for
MXO02057.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14802482..14803173 | 37..728 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:59 Download gff for
MXO02057.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14795582..14796273 | 37..728 | 100 | <- | Minus |