Clone Sequence Records
MXO02063.5prime Sequence
570 bp (570 high quality bases) assembled on 2007-04-02
> MXO02063.5prime
CAGTCGACATGCACATCACACGCCTCGCCCTTCGCCAGATTTCGCGCCAA
GTGCAGCTGCATCGCATGTACAGTGCAGCGGCTCCGGCCGCCGCAGTCTC
GGGTGCGGAAAAACTGGTGCCTCCCGCGCCGGAAGGAGCCGCCAAGCCAC
CCAATCCCAAACTGGACTCGATTGTCAACAACATTGCCGCGCTCAATCTC
CTCGAGGTGGCCGAGCTGAGCACCCTGCTCAAACAGAAACTGAACCTGCC
CGAGACCGCATTTGCCCCACAATTCGCCGCTGGGCCGGCACGTGCTGCTC
CCGCCGAGGATGAGGAGGAGGCAGCGCCCAAGAAGGTACAGACCTCCTTC
AAGGTCAAGCTGGTCAAGTTCGACGAAAAGCAGAAGGTGGCGCTGATCAA
GGAGGTGAAGAACCTACTCGAGGGCATGAACCTGGTGCAGGCCAAAAAGT
TCGTCGAGAGCGCACCGACCATCGTTAAGGAGGACATCCCCAAGGAGGAG
GCCGAGAAACTCAAGGAGGCACTGTCCAAGGCGGGCGCCATCATCGAGAT
CGAGGCAAGCTTTCTAGACC
MXO02063.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:08:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5012-PA | 549 | mRpL12-RA | 1..546 | 9..554 | 2730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:21:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL12-RA | 738 | CG5012-RA | 101..646 | 9..554 | 2730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:21:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8956947..8957492 | 9..554 | 2730 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:21:36 has no hits.
MXO02063.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:55 Download gff for
MXO02063.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5012-PA | 1..549 | 9..555 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:29:25 Download gff for
MXO02063.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL12-RA | 94..646 | 1..554 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:06 Download gff for
MXO02063.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL12-RA | 94..646 | 1..554 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:06 Download gff for
MXO02063.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8956940..8957492 | 1..554 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:29:25 Download gff for
MXO02063.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8950040..8950592 | 1..554 | 99 | | Plus |
MXO02063.3prime Sequence
570 bp (570 high quality bases) assembled on 2007-01-18
> MXO02063.3prime
ATGGTCTAGAAAGCTTGCCTCGATCTCGATGATGGCGCCCGCCTTGGACA
GTGCCTCCTTGAGTTTCTCGGCCTCCTCCTTGGGGATGTCCTCCTTAACG
ATGGTCGGTGCGCTCTCGACGAACTTTTTGGCCTGCACCAGGTTCATGCC
CTCGAGTAGGTTCTTCACCTCCTTGATCAGCGCCACCTTCTGCTTTTCGT
CGAACTTGACCAGCTTGACCTTGAAGGAGGTCTGTACCTTCTTGGGCGCT
GCCTCCTCCTCATCCTCGGCGGGAGCAGCACGTGCCGGCCCAGCGGCGAA
TTGTGGGGCAAATGCGGTCTCGGGCAGGTTCAGTTTCTGTTTGAGCAGGG
TGCTCAGCTCGGCCACCTCGAGGAGATTGAGCGCGGCAATGTTGTTGACA
ATCGAGTCCAGTTTGGGATTGGGTGGCTTGGCGGCTCCTTCCGGCGCGGG
AGGCACCAGTTTTTCCGCACCCGAGACTGCGGCGGCCGGAGCCGCTGCAC
TGTACATGCGATGCAGCTGCACTTGGCGCGAAATCTGGCGAAGGGCGAGG
CGTGTGATGTGCATGTCGAC
MXO02063.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 04:59:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5012-PA | 549 | mRpL12-RA | 1..546 | 564..19 | 2730 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:17:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL12-RA | 738 | CG5012-RA | 101..646 | 564..19 | 2730 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:17:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8956947..8957492 | 564..19 | 2730 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:17:14 has no hits.
MXO02063.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:16:55 Download gff for
MXO02063.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5012-PA | 1..549 | 18..564 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:04 Download gff for
MXO02063.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL12-RA | 96..646 | 19..570 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:04:09 Download gff for
MXO02063.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL12-RA | 96..646 | 19..570 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:04:09 Download gff for
MXO02063.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8956942..8957492 | 19..570 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:04 Download gff for
MXO02063.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8950042..8950592 | 19..570 | 99 | | Minus |
