MXO02072.3prime Sequence
414 bp (414 high quality bases) assembled on 2007-01-18
> MXO02072.3prime
ATGGTCTAGAAAGCTTGCGGCAGAGTTGTGGATGTTGAGACGGAAGATGT
CGTGGGCCACAAAGAAGGTGCCTGCGTTGGCCTTCAGGAAAAAGACCTGC
GAGAAGGCATGTGGGGGATCGTCATCGCACTGTAGTCTTCCAAGGACGTT
GATCAGAACTCCGCCATCGAAAGTTGGCTGCGAGTCCACTGTGGTTATCA
CTCTGGTAATCTTCTGAAAGCTCAGACTCTGAACTTTTTCCAGAATCTTG
GGTGCCCCCTGTATTTGGTGGCCTTCAAAGGTCATGAATGAGTCGGTAGC
GCTATAGAAATTAACCACGTTCGCCCGATTCGCCGGGTCATCGAATATCG
CATAGTACTGCTGCACAAATCCCTTGCCAATGTCCTCGTACTGCGGATTC
AGCGACATGTCGAC
MXO02072.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:00:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1740-PA | 393 | Ntf-2-RA | 1..390 | 408..19 | 1950 | 100 | Minus |
| CG10174-PA | 393 | Ntf-2r-RA | 1..334 | 408..75 | 1120 | 93.4 | Minus |
| CG10174-PA | 393 | Ntf-2r-RA | 349..390 | 60..19 | 160 | 95.2 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:31:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ntf-2-RE | 3078 | CG1740-RE | 146..535 | 408..19 | 1950 | 100 | Minus |
| Ntf-2-RA | 755 | CG1740-RA | 146..535 | 408..19 | 1950 | 100 | Minus |
| Ntf-2r-RA | 771 | CG10174-RA | 119..508 | 408..19 | 1515 | 92.6 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:31:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18454767..18455156 | 408..19 | 1515 | 92.6 | Minus |
| X | 23542271 | X | 21038743..21038856 | 132..19 | 570 | 100 | Minus |
| X | 23542271 | X | 21035614..21035722 | 408..300 | 545 | 100 | Minus |
| X | 23542271 | X | 21036536..21036637 | 231..130 | 510 | 100 | Minus |
| X | 23542271 | X | 21036399..21036470 | 300..229 | 360 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:31:05 has no hits.
MXO02072.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:01 Download gff for
MXO02072.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1740-PA | 1..393 | 18..408 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:35:33 Download gff for
MXO02072.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ntf-2-RA | 141..535 | 19..414 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:25:04 Download gff for
MXO02072.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ntf-2-RA | 141..535 | 19..414 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:25:04 Download gff for
MXO02072.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18454762..18455155 | 20..414 | 91 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:35:33 Download gff for
MXO02072.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18454762..18455155 | 20..414 | 91 | <- | Minus |
MXO02072.5prime Sequence
792 bp (750 high quality bases) assembled on 2007-01-18
> MXO02072.5prime
GCGGCCGCGACGTCCACATATACCTGCCGTTCACTATTATTTAGTGAAAT
GAGATATTATGATATTTTCTGAATTGTGATTAAAAAGGCAACTTTATGCC
CATGCAACAGAAACTATAAAAAATACAGAGAATGAAAAGAAACAGATAGA
TTTTTTAGTTCTTTAGGCCCGTAGTCTGCAAATCCTTTTATGATTTTCTA
TCAAACAAAAGAGGAAAATAGACCAGTTGCAATCCAAACGAGAGTCTAAT
AGAATGAGGTCGAAAAGTAAATCGCGCGGGTTTGTTACTGATAAAGCAGG
CAAGACCTAAAATGTGTAAAGGGCAAAGTGTATACTTTGGCGTCACCCCT
TACATATTTTAGGTCTTTTTTTATTGTGCGTAACTAACTTGCCATCTTCA
AACAGGAGGGCTGGAAGAAGCAGACCGCTAACACAGTACATAAAAAAGGA
GACATGAACGATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTAA
CCTTTACTACCGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAA
GAAACGAACCAAAAGCCATATAAGGAAACATACGGCATTTCCCATATTAC
ACGCCATGATATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATA
AAGTTCCTGAGTTCGATTCGTCCACAATTAAAAATATCTCTTCTGCAAAA
GGCCTGGACGTTTGGGACAGCTGGCCATTACAAAACACTGACGGCACTGT
CGCAAACTATCACGGCTACCACATCGTCTTTGCATTAGCCGG
MXO02072.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed on 2007-05-10 05:01:00 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 21:57:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed on 2014-11-28 21:57:28 has no hits.
Blast to na_te.dros performed on 2014-11-28 21:57:29 has no hits.
MXO02072.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 22:54:37 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 22:54:37 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 00:39:45 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 00:39:45 has no hits.
