Clone Sequence Records
MXO02074.3prime Sequence
330 bp (330 high quality bases) assembled on 2007-01-18
> MXO02074.3prime
ATGGTCTAGAAAGCTTGCATGTGATGTTTCATTGGCCTTTGCTTGGTTGC
GTCGCTTGATGTGCCGCGGATTGTTGCAAATCTTTTCGCAGTCTTCAAGG
GTTAAGAACAGCTTTCGATTACTGCATCCCATGTAGCGACAACGTTGTGT
CTCCGGATCGAAAAATATGCCCAGGGTAGATGGGCTACATAGCCACACAC
TCTTATTCGGCGCCGTCTGGCATGCATCTCGAACAACCGCCTCTGCAGTG
AATGGTTGTTCCAGGATAACGGCCAAAATCACACAAAATCCAATGGTGAT
TCTTAGCTGACTGAAGTTGGCCATGTCGAC
MXO02074.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:01:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31778-PA | 309 | CG31778-RA | 1..306 | 324..19 | 1530 | 100 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31778-RB | 918 | CG31778-RB | 516..821 | 324..19 | 1530 | 100 | Minus |
| CG31778-RA | 1137 | CG31778-RA | 516..821 | 324..19 | 1530 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3704422..3704633 | 19..230 | 1060 | 100 | Plus |
| 2L | 23513712 | 2L | 3704879..3704973 | 230..324 | 475 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:20:02 has no hits.
MXO02074.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:02 Download gff for
MXO02074.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31778-PA | 1..309 | 16..324 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:28 Download gff for
MXO02074.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31778-RA | 510..825 | 15..330 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:30 Download gff for
MXO02074.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31778-RA | 510..825 | 15..330 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:30 Download gff for
MXO02074.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3704423..3704633 | 20..230 | 100 | <- | Plus |
| 2L | 3704880..3704978 | 231..330 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:28 Download gff for
MXO02074.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3704880..3704978 | 231..330 | 97 | | Plus |
| arm_2L | 3704423..3704633 | 20..230 | 100 | <- | Plus |
MXO02074.5prime Sequence
330 bp (330 high quality bases) assembled on 2007-04-02
> MXO02074.5prime
CAGTCGACATGGCCAACTTCAGTCAGCTAAGAATCACCATTGGATTTTGT
GTGATTTTGGCCGTTATCCTGGAACAACCATTCACTGCAGAGGCGGTTGT
TCGAGATGCATGCCAGACGGCGCCGAATAAGAGTGTGTGGCTATGTAGCC
CATCTACCCTGGGCATATTTTTCGATCCGGAGACACAACGTTGTCGCTAC
ATGGGATGCAGTAATCGAAAGCTGTTCTTAACCCTTGAAGACTGCGAAAA
GATTTGCAACAATCCGCGGCACATCAAGCGACGCAACCAAGCAAAGGCCA
ATGAAACATCACATGCAAGCTTTCTAGACC
MXO02074.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:08:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31778-PA | 309 | CG31778-RA | 1..306 | 9..314 | 1530 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:32:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31778-RB | 918 | CG31778-RB | 516..821 | 9..314 | 1530 | 100 | Plus |
| CG31778-RA | 1137 | CG31778-RA | 516..821 | 9..314 | 1530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3704422..3704633 | 314..103 | 1060 | 100 | Minus |
| 2L | 23513712 | 2L | 3704879..3704973 | 103..9 | 475 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:32:46 has no hits.
MXO02074.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:03 Download gff for
MXO02074.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31778-PA | 1..309 | 9..317 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:28:07 Download gff for
MXO02074.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31778-RA | 508..825 | 1..318 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:16:13 Download gff for
MXO02074.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31778-RA | 508..825 | 1..318 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:16:13 Download gff for
MXO02074.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3704423..3704633 | 103..313 | 100 | <- | Minus |
| 2L | 3704880..3704979 | 1..102 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:28:07 Download gff for
MXO02074.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3704423..3704633 | 103..313 | 100 | <- | Minus |
| arm_2L | 3704880..3704979 | 1..102 | 96 | | Minus |
