MXO02076.5prime Sequence
498 bp (498 high quality bases) assembled on 2007-04-04
> MXO02076.5prime
CAGTCGACATGGGCGAACCGAAAGCCACCGCAGACCCTGGGGAGGAGCAG
GCCTTCAACTGCGAGGACGAAGCCAACGCCATAATTAACGATGTTAAGGC
TCACGTCGCTGAGATTTGCATCTCATCCAAACTGGCAAGCGATGCCACGC
AAATTTACCTGAACATCCGGACTATCGAGAGCGCCACTTGCTGCGTTCAG
GTGAGCAGTCGTGGCTTCAAGATCGTCTCCTCCCAGTACGACACCATAGA
CGAGGACAGCCGGATCTCTGCACTGCTTCGCAACGGACAAGAGCAAGGCG
ACGACGAGGAGGAGGAGATATTTGAAACGCCGTACGCGCTGCTGGACAAG
ATCAGCCCCCGCTACGTCGAGTCGTTCGGCAACCAGCTGTGCCAGCAGCT
TAGAGCGCTGCAACAGATGCGAACCGAGTTCAACGAGGAGGACGAGGAGG
AGGAGGAGGAGGCGGAGGAGGAGGAGAAGAAGGCAAGCTTTCTAGACC
MXO02076.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:08:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6874-PA | 666 | l(3)neo26-RA | 1..653 | 9..661 | 3215 | 99.6 | Plus |
CG6874-PB | 666 | l(3)neo26-RB | 1..653 | 9..661 | 3215 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:11:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11523-RA | 874 | CG11523-RA | 126..599 | 9..482 | 2370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:11:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 22266081..22266554 | 482..9 | 2370 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:11:49 has no hits.
MXO02076.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:04 Download gff for
MXO02076.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6874-PB | 1..653 | 9..661 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:33 Download gff for
MXO02076.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11523-RA | 126..599 | 9..482 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:24 Download gff for
MXO02076.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11523-RA | 126..599 | 9..482 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:52:24 Download gff for
MXO02076.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 22266081..22266554 | 9..482 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:33 Download gff for
MXO02076.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 22259181..22259654 | 9..482 | 100 | | Minus |