Clone MXO02076 Report

Search the DGRC for MXO02076

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:20
Well:76
Vector:pMK33-CTAP-BD
Associated Gene/TranscriptCG11523-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO02076.5prime Sequence

498 bp (498 high quality bases) assembled on 2007-04-04

> MXO02076.5prime
CAGTCGACATGGGCGAACCGAAAGCCACCGCAGACCCTGGGGAGGAGCAG
GCCTTCAACTGCGAGGACGAAGCCAACGCCATAATTAACGATGTTAAGGC
TCACGTCGCTGAGATTTGCATCTCATCCAAACTGGCAAGCGATGCCACGC
AAATTTACCTGAACATCCGGACTATCGAGAGCGCCACTTGCTGCGTTCAG
GTGAGCAGTCGTGGCTTCAAGATCGTCTCCTCCCAGTACGACACCATAGA
CGAGGACAGCCGGATCTCTGCACTGCTTCGCAACGGACAAGAGCAAGGCG
ACGACGAGGAGGAGGAGATATTTGAAACGCCGTACGCGCTGCTGGACAAG
ATCAGCCCCCGCTACGTCGAGTCGTTCGGCAACCAGCTGTGCCAGCAGCT
TAGAGCGCTGCAACAGATGCGAACCGAGTTCAACGAGGAGGACGAGGAGG
AGGAGGAGGAGGCGGAGGAGGAGGAGAAGAAGGCAAGCTTTCTAGACC

MXO02076.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-11 12:08:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG6874-PA 666 l(3)neo26-RA 1..653 9..661 3215 99.6 Plus
CG6874-PB 666 l(3)neo26-RB 1..653 9..661 3215 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:11:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG11523-RA 874 CG11523-RA 126..599 9..482 2370 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:11:48
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22266081..22266554 482..9 2370 100 Minus
Blast to na_te.dros performed on 2014-11-28 22:11:49 has no hits.

MXO02076.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:04 Download gff for MXO02076.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6874-PB 1..653 9..661 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:33 Download gff for MXO02076.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11523-RA 126..599 9..482 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:24 Download gff for MXO02076.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11523-RA 126..599 9..482 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:52:24 Download gff for MXO02076.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 22266081..22266554 9..482 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:33 Download gff for MXO02076.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22259181..22259654 9..482 100   Minus