MXO02078.3prime Sequence
800 bp (750 high quality bases) assembled on 2007-01-18
> MXO02078.3prime
ATGGTCTAGAAAGCTTGCATTTTTATTGTTCTTGTAAAAGGCCAGCATCA
GATTGGCCAACTGTTGGGTCTCCGCCAGCGTTACAGCATTGTAGAGGGAG
GCTCGAATGCCGCCCACCGACCGATGACCCTTCAACTGAATCATGCCCTC
GGCCTCGGCTTTGCTCAGGAACTCCTTCTCCAGGGCATCATCTCCACTGG
CACTGCCAATACGGAAGGGCACATTCATGCGCGAACGCACATTGACATCC
ACTGGGCAGTAGTAGAAACCATTCGACTGGTTGATCGTGTCGTAAATCAA
CTTGGACTTGGCTGCCGCCAGCTTGGCCATACCAGCGACTCCTCCGTTCC
GCTTGATCCACTTGAAAACCAGGCCCATCACATAGATGCCAAAGGTCGGC
GGAGTATTTAACAGGGAGTTGTTCTTGTCCATCTGCTCAAAGTTGAGGAT
GGAGGGCGTAATCTTCAAGTGCTTGCCTATCAAATCGTCCCTGACAATGA
TCACCGTGGTGCCCGCTGGTCCGATATTCTTCTGGGCTCCCGCATAGATA
ACGCCAAACTTGGAGACATCGAAGGGACGCTACAGAAAATTGGAGGACAT
ATCGGCCACCAGTGGCACACCGGCTGGAACCTCGGGCACAAAGTCGAACT
CCACGCCCTCTACGGTCTCATTGTCGCAGTAGTAGACATATGAGGCATTT
GGGTCCAGCTTCCAGGTCTCCTGTCGTGGAACAGTTGTATACTTTGCCAA
CTTGGGCAGCACCGCGTTCACAGTGCCGTACTGAGCCGCCTCCTTTGGCG
MXO02078.3prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-05-10 05:01:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11899-PA | 1095 | CG11899-RA | 316..1092 | 795..19 | 3860 | 99.8 | Minus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11899-RA | 1176 | CG11899-RA | 383..1159 | 795..19 | 3870 | 99.9 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29200921..29201327 | 795..389 | 2020 | 99.8 | Minus |
| 3R | 32079331 | 3R | 29201383..29201753 | 389..19 | 1855 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:03:39 has no hits.
MXO02078.3prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-05-11 19:17:05 Download gff for
MXO02078.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11899-PA | 311..1095 | 16..800 | 99 | | Minus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:12 Download gff for
MXO02078.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11899-RA | 378..1163 | 15..800 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:07 Download gff for
MXO02078.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11899-RA | 378..1163 | 15..800 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:07 Download gff for
MXO02078.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29200916..29201327 | 389..800 | 99 | -> | Minus |
| 3R | 29201384..29201757 | 15..388 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:23:12 Download gff for
MXO02078.3prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25026638..25027049 | 389..800 | 99 | -> | Minus |
| arm_3R | 25027106..25027479 | 15..388 | 99 | | Minus |
